Abstract
Assessing the quality of experiments, both directly and through replication attempts, is becoming a grave concern in biomedicine. This is especially true in omics experiments, where thousands of independent measurements are done in parallel, with the understanding that only a small minority will probe scientifically meaningful effects – a state of affairs conductive to mistaking false positives for scientific discoveries. A currently popular way to deal with false positives in omics is to calculate the Bayesian false-discovery rate (FDR) using, for the prior, the information present in the multitude of parallel measurements of a single omics experiment. To this picture we add a simple method to calculate a retrospective power that is compatible with the FDR. This allows to give a rich account of the quality and potential replicability of the results of almost any omics experiment. As proof of concept we assessed the quality of the 9202 high-throughput sequencing experiments from Entrez GEO database.Poor reproducibility, the inability of reproducing, by using the original data, the original data analysis exactly, and replicability, the inability of reproducing, by new experiments, the original data approximately, have become major concerns in experimental biomedical science. So far reproducibility and replicability issues have been mostly addressed in different studies, making it difficult to prise apart their relative contributions to the quality of an experimental system in the wild {Iqbal:2016es}.
Determining the reproducibility of a study is relatively straightforward – one needs to ascertain that the original data analysis methods are described in sufficient detail and that the original data is obtainable in an analysable form.
Reproducibility of a study merely suggest that the data analysis of the original study was done, if not correctly, at least successfully by following the published plan.
Reproducibility is a minimum requirement for soundness of a study, but does not guarantee it {Bollen:2015wf}.
Neither does a successful replication generate new evidence in favour or a scientific hypothesis {Goodman:2016bo}.
In contrast, a replication study generates new data by the original experimental procedures (although not necessarily the original data analytic methods). Replicability presupposes that we have access to a sufficiently detailed description of the experimental aspects of the study. Unlike a successful reproduction of a study, a successful replication introduces new evidence to science and thus essentially constitutes a form of meta-analysis, which has the potential to change the conclusions of the original study {Goodman:2016bo}. A successful replication is no guarantee for stability of conclusions – indeed, studies that give negative results individually can point to scientifically meaningful effects, when analysed together {Goodman:2016bo}. Moreover, even when presented with identical data there is room for reasonable disagreements about scientific conclusions among people with different interpretations of the scientific context of the problem {Maivali:2015wr}. There are two major hurdles in the replication business: the high cost of actually repeating experiments and a lack of consensus on how to measure replicability, which has led to the presentation of several potentially contradictory measures of replicability, even in the same paper (REF). This makes it desirable to first estimate in silico, which studies are worth replicating in the lab, and how to best replicate them.
To do this efficiently, we will concentrate on a single experimental system: differential expression profiling by RNA sequencing. RNA-seq has several advantages as a model system for studying experimental quality. It is currently a widely used and fast-growing system, suggesting that many new researchers adopt it every year 1. With a typical experiment costing in the range of … it consumes a great deal of public funding.
Nuleotide sequences and associated metadata is stored in three major public repositories – NCBI Sequence Read Archive (SRA), the European Bioinformatics Institute (EBI), and the DNA Database of Japan (DDBJ) that share data under International Nucleotide Sequence Database Collaboration (INSDC).
In contrast to INSDC, NCBI GEO functional genomics database also requires submission of a processed or summary data from which the conclusions in associated manuscripts are based. GEO arranges submission of the uploaded raw data files to SRA. Importantly, processed summary data allows the direct evaluation and reproduction of analysis.
RNA-seq is usually done in a massively parallel way, testing for differential expression between experiment and control conditions of thousands of RNA pairs. This allows to check the quality of each RNA-seq experiment by examining the distribution of the p values that were calculated by the original authors and were used by them to make inferences about differential expression of individual RNAs in their study (REF). Equally importantly, when these p values indicate a technically successful experiment, they can be further used to calculate the false discovery rate (FDR) and the stable retrospective power (SRP), which together enable to analyse the replication potential of the study (REF). This leads to a quality control procedure that works by sequential elimination and first discards the studies that do not describe their methods or deposit data, then the ones whose data (the p values) indicate serious problems with experimental design and/or data analysis, and finally the studies, whose low power suggests scientific irrelevance. Thus we aim to estimate the general quality of the RNA-seq field, determine the quality of individual studies, estimate the efficiency of potential replication studies, propose improvements in the design of these replication studies, and determine, which step of the RNA-seq process would have the greatest gains in terms of the overall health of the field, should improvements be targeted to it.
We believe that the health of a field of science can be best and cheapest gauged by a sequential elimination procedure: (1) estimating the fraction of reproducible publications in it, (2) actually reproducing its analyses, where possible, and checking for signs of failed experimental design and data analyses, (3) from the publications that by reproducibility criteria are worthy of replication attempts, estimating the statistical power of the experimental systems to provide reproducible results in replication studies, as well as the number of true effects left undiscovered in the original study that could be found in the replication study, (4) estimating the magnitude of changes to the experimental protocol (especially to sample size) that would allow high-powered replication studies.
Here we offer an integrated picture of the reproducibility and expected replicability of a modern and popular method of determining differential expression levels of RNAs, namely expression profiling by RNA sequencing.
We set out to assess following checklist for RNA-seq experiments submitted to Entrez GEO database.
Data was queried from NCBI GEO database by using eSearch E-Util with search string “expression profiling by high throughput sequencing[DataSet Type]” using entrezquery R package. GEO UIDs were extracted from query results with xml2 package v1.2.0 (Wickham, Hester, and Ooms 2018). UIDs were used to retrieve GEO document summaries using eSummary E-Util. Metadata was extracted from document summaries using xmlSApply function from XML package v3.98-1.17 (Temple Lang and CRAN Team 2019) and FTPLinks were used to identify supplemental files. We excluded from downloading supplemental files which contained pattern: ‘filelist’ ,‘annotation’ ,‘readme’ ,‘error’ in the file name and we also excluded files with following pattern ‘raw.tar’ ,‘csfasta’ ,‘bam’ ,‘sam’ ,‘bed’ ,‘[:punct:]hic’ ,‘hdf5’ ,‘bismark’ ,‘map’ ,‘barcode’ ,‘peaks’ ,‘tar’ ,‘gtf’ ,‘(big)?bed(.txt|12|graph|pk)?’ ,‘bw’ ,‘wig’ ,‘hic’ ,‘gct(x)?’ ,‘tdf’ ,‘gff(3)?’ ,‘pdf’ ,‘png’ ,‘zip’ ,‘sif’ ,‘narrowpeak’ ,‘fa(sta|stq)?’ ,‘r\(' ,'rda(ta)?\)’ in the file extension. Flat tables were imported into R using fread function from package data.table v1.12.0 (Dowle and Srinivasan 2019). MS Excel xls(x) files were imported using read_excel function from package readxl v1.2.0 (Wickham and Bryan 2018). Compressed xls(x) files were uncompressed before import using gzip. HT-seq experiment metadata was extracted from series matrix files. Supplementary files and series matrix files were downloaded using entrezquery package.
Exact binomial test was used to test differences in proportions. Proportion of true nulls was calculated using propTrueNull function from limma package v3.38.3 (???).
Source code is available in github repo org/reponame.
To assess the quality of high-throughput sequencing datasets we queried the NCBI GEO database for “expression profiling by high throughput sequencing”. Query retrieved 16427 datasets. GEO database shows exponentially growing number of HT-seq data set submissions between 2006 and 2017 (Fig. 1). First HT-seq data set was submitted to GEO database at 2006-09-08. We limited our query for datasets submitted up to the 2017-12-31 to reduce the number of recent incomplete submissions.
Approximately 68% of GEO data sets (11199) contain data from mouse or human origin (Fig. 1, left facet). The 87% (95%CI, 86.3% to 87.6%) of human and mouse data sets are linked to their primary publication. The proportion of datasets with publications is lower when other taxa are used as model organisms 78% (95%CI, 76.7% to 79.0%)(Fig. 1, right facet). As expected, the gap between published GEO series and published articles is bigger for more recent submissions.
For the human and mouse subset, we were able to identify supplementary files for 97% (13120) of GEO series.
The data sets lacking public supplementary files nevertheless show 83% publication rate (95%CI, 79.6% to 86.6%) which is similar to data sets with supplementary files.
Figure 1: Datasets submitted to NCBI GEO database featuring expression profiling by high-throughput sequencing. GEO series submission dynamics and associated publications of HT-seq data. Left facet, submissions featuring human or mouse data, N = 11199. Right facet, submissions of other taxa, N = 5228. Dashed line, GEO series with publications.
We sought to determine the compliance with the formal requirements for GEO data submission (https://www.ncbi.nlm.nih.gov/geo/info/seq.html). This pertains to the reproducibitly of data analysis. GEO archive has three required components: metadata, processed data, and raw data. Minimally these processed files are required to contain raw or normalized sequence read counts, or peak files of ChIP-Seq data. While, in the presence of raw data, supplementary data is not strictly neccessary for reproducibility, reproducing analysis from the raw data requires the reproduction of the full analysis, starting from re-aligning sequences to the genome, which can be practically unfeasible.
Supplementary HT-seq files uplodaded to NCBI GEO contain most commonly raw or processed sequence data files as a ‘RAW.tar’ archive and associated automatically generated ‘filelist.txt’ file (Fig. 2). ‘RAW.tar’ archive contains one file per sample and samples can be directly mapped to metadata by using sample name.
Figure 2: Filename extensions and common stubs of supplementary file names from HT-seq datasets submitted to NCBI GEO database. (A) File extensions of supplementary file names. (B) Common stubs of supplementary file names. Stubs were obtained by removing GEO id from supplementary file names and converting string to lower case. Stubs with N > 10 occurences are shown.
RAW.tar files are included in 59% (7727) of GEO series, whereas only RAW.tar and filelist.txt is present in 47% (6203) GEO series (Fig. 2 and 3).
Figure 3: Submission and publication of GEO series with only RAW.tar and filelist.txt supplementary files.
Other common files contain annotations ‘readme.txt’ and processed data: commonly sequence read counts, gene expression analysis results or ChIP-Seq peak counts.
Sequence read counts can be either as raw read counts or normalised read counts. Gene expression analysis of HT-seq data is commonly performed by fitting models to discrete sequence read count data. Normalised sequence read counts are used for plotting and visual evaluation of the analysis results, but cannot be used to directly reproduce gene expression analysis.
However, tables containing top-ranked genes/features (toptables) from gene expression analysis with complete set of raw P values allow direct evaluation of the data and analysis quality underlying tested hypothesis.
Figure 4: Distribution of supplementary files per GEO Accession before and after filtering supplementary files for download. Left, all supplementary files. Right, supplementary files to be downloaded after filtering for tabular formats. Numbers show total number of files, respectively, before and after filtering.
GEO datasets contain most commonly one to two supplementary files per Accession and up to 269 files per Accession (Fig. 4). To reduce number of files to be downloaded from GEO database, based on file extensions and filenames, we excluded from the dataset files that most plausibly don’t contain final processed data in a tabular format, such as binary files, annotations, raw data, graphics, and other non tabular files. This filter reduced the number of files by 62% (Fig. 4) and GEO series by 53%. Resulting dataset consisted of 12776 files from 6178 GEO series to be downloaded.
Figure 5: Retention of HT-seq GEO series and supplementary files in filter for full sets of p values. Arrows from left to right, (1) GEO sets with supplementary files, (2) filter out RAW.tar and filelist.txt files from supplementary file names, (3) supplementary files with flat table formats that were downloaded, (4) tables with p values. Number of p value sets is the number of sets with >1000 features.
Figure 6: Global view on number of samples and features of HT-seq experiments. (A) Number of features in GEO series where supplementary file with p values was uploaded (dark grey) compared to all GEO series with supplementary files (light grey). (B) Number of samples in GEO series where p values were available (dark grey) compared to all series with supplementary files (light grey). (C) Mean number of samples was 27 and median 8. Most frequent sample size was 6. Mean number of features was 62096 and median 21120.5. Number of samples was taken from series matrix files and number of features is number of rows in supplementary files. Dashed line denotes cutoff for complete sets of features/p values.
Figure 7: Proportion of true null hypotheses in P value sets. (A) Distribution of estimated \(\pi0\) values in reported GEO HT-seq P value sets. (B) Distribution of \(\pi0\) versus number of features. Blue line, loess fit. P value sets with >1000 features are shown.
Figure 8: Journals publishing HT-seq data. (A) Top 20 journals publishing non-human or -mouse datasets. (B) Top 20 journals publishing human or mouse datasets. (C) Top 10 journals publishing articles reporting P values in GEO supplementary files.
Figure 9: Citation of articles featuring HT-seq data. (A) Distribution of the number of citations in P value sets displaying anti-conservative histogram compared to other histogram types. (B) Relationship between the proportion of true nulls and number of citations. Blue line, linear model fit. Citation data is from Scopus database.
Figure 10: Phylogenetic tree of P value histograms. Tree was obtained by clustering of the empirical cumulative distribution function outputs of P value histograms. Colors show groups obtained by cutting the tree at the height giving six clusters.
Figure 11: Sample size in HT-seq GEO series. Experimental groups were inferred from GEO series matrix files and mean samples size was calculated from experimental group sizes.
Figure 12: Proportion of true nulls versus sample size. Proportion of true nulls was calculated for anti-conservative P value sets.
| Type | n | % |
|---|---|---|
| anti-conservative | 468 | 30.0% |
| bimodal | 300 | 19.3% |
| conservative | 670 | 43.0% |
| other | 56 | 3.6% |
| spiky | 57 | 3.7% |
| uniform | 7 | 0.4% |
| Type | n | % |
|---|---|---|
| anti-conservative | 173 | 79.4% |
| other | 37 | 17.0% |
| spiky | 6 | 2.8% |
| uniform | 2 | 0.9% |
| Type conversion | n | % |
|---|---|---|
| improvement | 56 | 25.7% |
| no improvement | 31 | 14.2% |
| same bad | 14 | 6.4% |
| same good | 117 | 53.7% |
| Accession | Supplementary file name (with p-value set id) | Histogram | Type | pi0 | Histogram after filter | Type after filter | pi0 after filter | Organism | Taxid | Multiple_taxons |
|---|---|---|---|---|---|---|---|---|---|---|
| GSE94840 | GSE94840_Alox5_vs_Control.all.gene.result.txt.gz | other | NA | other | NA | Mus musculus | 10090 | FALSE | ||
| GSE83664 | GSE83664_NS_M_vs_Input.isoform_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Transcript_Sb_36v48.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE89364 | GSE89364_mav_RNASeq_exp_deqiangs.xlsx | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE72712 | GSE72712_ESCd_gt70_over_ESCd_40-70.cuffdiff.xlsx-sheet-EST-d_gt70_over_EST-d_40-70 | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE77303 | GSE77303_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE73678 | GSE73678_Differential_gene_expression.xlsx.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE66652 | GSE66652_AS13-C_differential_expression.txt.gz | bimodal | NA | NA | NA | NA | Rhizoctonia solani AG-3 Rhs1AP | 1086054 | FALSE | |
| GSE63748 | GSE63748_exp_7d4h_diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE50156 | GSE50156_nmt1-hsf1_MMThi-_AND_WT_MMThi-.txt.gz | conservative | NA | NA | NA | NA | Schizosaccharomyces pombe | 4896 | FALSE | |
| GSE94587 | GSE94587_DESEQ_Female_WT_vs_Female_del.txt.gz | bimodal | NA | anti-conservative | 0.83 | Homo sapiens | 9606 | FALSE | ||
| GSE83664 | GSE83664_NS_vs_Input.isoform_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Transcript_SbvSv_24.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE77471 | GSE77471_RNASEQ_differential_expression.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE72712 | GSE72712_ESCd_gt70_over_ESCd_lt40.cuffdiff.xlsx-sheet-EST-d_gt70_over_EST-d_lt40 | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE70382 | GSE70382_DESeq_allresp_vs_nonresp.xlsx-sheet-Blad1 | conservative | NA | uniform | NA | Anguilla anguilla | 7936 | FALSE | ||
| GSE61566 | GSE61566_isoform_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE61733 | GSE61733_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE50156 | GSE50156_ssa2D_AND_WT_24oC.txt.gz | conservative | NA | NA | NA | NA | Schizosaccharomyces pombe | 4896 | FALSE | |
| GSE99397 | GSE99397_CreNeg-MHCPos_vs_Control.CuffDiff.gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE94587 | GSE94587_DESEQ_Male_WT_vs_Female_WT.txt.gz | bimodal | NA | anti-conservative | 0.60 | Homo sapiens | 9606 | FALSE | ||
| GSE90974 | GSE90974_Cuffdiff_Transcript_SbvSv_36.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE72712 | GSE72712_ESCd_gt70_over_ESCu.cuffdiff.xlsx-sheet-EST-d_gt70_over_EST-u.cuffdiff | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE64687 | GSE64687_FPKM_and_differential_expression_for_mRNA.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE66652 | GSE66652_S4-C_differential_expression.txt.gz | bimodal | NA | NA | NA | NA | Rhizoctonia solani AG-3 Rhs1AP | 1086054 | FALSE | |
| GSE61690 | GSE61690_DormantvsNondormant_meristems.txt.gz | bimodal | NA | NA | NA | NA | Solanum tuberosum | 4113 | FALSE | |
| GSE99397 | GSE99397_CreNeg-MHCPos_vs_CrePos-MHCNeg.CuffDiff.gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE94587 | GSE94587_DESEQ_Male_WT_vs_Male_del.txt.gz | bimodal | NA | anti-conservative | 0.80 | Homo sapiens | 9606 | FALSE | ||
| GSE90974 | GSE90974_Cuffdiff_Transcript_SbvSv_48.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE72806 | GSE72806_CUFFDIFF_CONTROL_vs_HEAT_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE81522 | GSE81522_N2_vs_ok600_gene_differential_expression_testing.txt.gz | conservative | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE84450 | GSE84450_WT_UTvsKO_DTT_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE72712 | GSE72712_ESCd_lt40_over_ESCu.cuffdiff.xlsx-sheet-EST-d_lt40_over_EST-u.cuffdiff | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE29992 | GSE29992_Het1_KO2_expr.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE99397 | GSE99397_CrePos-MHCNeg_vs_Control.CuffDiff.gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87626 | GSE87626_nc_vs_19_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Transcript_SbvSv_Global.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE75614 | GSE75614_processed_data_mrna-seq_differential_expression.xlsx | conservative | NA | NA | NA | NA | Tachysurus vachellii | 175792 | FALSE | |
| GSE72806 | GSE72806_CUFFDIFF_CONTROL_vs_SALT_HEAT_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE84450 | GSE84450_WT_UTvsKO_UT_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE75787 | GSE75787_gene_exp.diff.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE66445 | GSE66445_M._a.-pES1-MATmcr3_methane_vs._M.a.-pES1-MATmcr3_methanol_GEO_Processed_data.xlsx-sheet-Sheet1 | conservative | NA | NA | NA | NA | Methanosarcina acetivorans | 2214 | FALSE | |
| GSE63707 | GSE63707_DEXSeqResults_IFMWT_03d_vs_jump_0d.txt.gz | bimodal | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE61566 | GSE61566_promoters.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE85416 | GSE85416_isoform_exp.diff.gz | conservative | NA | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Transcript_Sv_24v36.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE73321 | GSE73321_FW_VS_BW_expression_diff.txt.gz | other | NA | NA | NA | NA | Plecoglossus altivelis | 61084 | FALSE | |
| GSE74886 | GSE74886_processedFPKMS.xlsx | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE72806 | GSE72806_CUFFDIFF_CONTROL_vs_SALT_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE84450 | GSE84450_WT_UTvsWT_DTT_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE68229 | GSE68229_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE64840 | GSE64840_2N_Ts65Dn_MEFs.gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE63707 | GSE63707_DEXSeqResults_IFMWT_03d_vs_leg_0d.txt.gz | bimodal | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE61566 | GSE61566_splicing.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE54602 | GSE54602_D4_D8_D11_D14_isoform_exp.diff.parsed.txt.gz-set-0 | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE54602 | GSE54602_D4_D8_D11_D14_isoform_exp.diff.parsed.txt.gz-set-1 | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE54602 | GSE54602_D4_D8_D11_D14_isoform_exp.diff.parsed.txt.gz-set-2 | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE43431 | GSE43431_mRNA_STHdh_CUFF_gene_exp.diff.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Transcript_Sv_24v48.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE87315 | GSE87315_CuffDiff_RNA-seq.csv.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE84249 | GSE84249_cuffdiff_gene_differential_expression_testing.tab.gz | conservative | NA | NA | NA | NA | Rattus norvegicus | 10116 | FALSE | |
| GSE84450 | GSE84450_WT_UTvsWT_DTT_splicing.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE68229 | GSE68229_isoform_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE70584 | GSE70584_Liberman2015_Wholeroot_CUFFLINKS_gene_exp.txt.gz | conservative | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE67954 | GSE67954_CSR1_RNAi_DESeq_output.txt.gz | bimodal | NA | other | NA | Caenorhabditis elegans | 6239 | FALSE | ||
| GSE63091 | GSE63091_diffana_DESeq_GFP-4A3-Y14_MLN51-UPF1.Ensembl65.tsv.gz-set-0 | conservative | NA | anti-conservative | 0.94 | Homo sapiens | 9606 | FALSE | ||
| GSE63091 | GSE63091_diffana_DESeq_GFP-4A3-Y14_MLN51-UPF1.Ensembl65.tsv.gz-set-1 | conservative | NA | anti-conservative | 0.99 | Homo sapiens | 9606 | FALSE | ||
| GSE63091 | GSE63091_diffana_DESeq_GFP-4A3-Y14_MLN51-UPF1.Ensembl65.tsv.gz-set-2 | conservative | NA | other | NA | Homo sapiens | 9606 | FALSE | ||
| GSE63091 | GSE63091_diffana_DESeq_GFP-4A3-Y14_MLN51-UPF1.Ensembl65.tsv.gz-set-3 | conservative | NA | other | NA | Homo sapiens | 9606 | FALSE | ||
| GSE61566 | GSE61566_tss_group_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE97395 | GSE97395_Treat_vs_control_diff.txt.gz | spiky | NA | anti-conservative | 0.60 | Homo sapiens | 9606 | FALSE | ||
| GSE90974 | GSE90974_Cuffdiff_Transcript_Sv_36v48.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE84450 | GSE84450_WT_UTvsX_DTT_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE73289 | GSE73289_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE67954 | GSE67954_P_granule_RNAi_DESeq_output.txt.gz | conservative | NA | other | NA | Caenorhabditis elegans | 6239 | FALSE | ||
| GSE48230 | GSE48230_PC3-EMT14-OVOL1_v_PC3-EMT14-OVOL2_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE42443 | GSE42443_Brg1cKO_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE85565 | GSE85565_Result_Table.csv.gz | spiky | NA | anti-conservative | 0.55 | Homo sapiens | 9606 | FALSE | ||
| GSE90974 | GSE90974_Cuffdiff_Transcript_SvvRv_24.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE84450 | GSE84450_WT_UTvsX_UT_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE81858 | GSE81858_AA_ABBB_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Equus caballus | 9796 | FALSE | |
| GSE70584 | GSE70584_Liberman2015_sorted_CUFFLINKS_gene_exp.txt.gz | bimodal | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE48230 | GSE48230_PC3-EMT14-OVOL1_v_PC3-EMT14-OVOL2_isoform_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Transcript_SvvRv_36.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE76304 | GSE76304_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE70668 | GSE70668_DD_gene_exp.diff.csv.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE56013 | GSE56013_A.Wildtype_wholefly_DCVrel.Mock.txt.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE48230 | GSE48230_PC3-EMT14_v_PC3-EMT14-OVOL1_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Transcript_SvvRv_48.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE64025 | GSE64025_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE68470 | GSE68470_xue_etal_edgeR.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE58053 | GSE58053_1mm-over-0mm.txt.gz | bimodal | NA | NA | NA | NA | Nitrobacter winogradskyi | 913 | FALSE | |
| GSE56013 | GSE56013_B.G9amutant_wholefly_DCVrel.Mock.txt.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE49716 | GSE49716_pei1vspei3_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE49700 | GSE49700_FB_FLM.RNA.txt.gz | other | NA | NA | NA | NA | Tuber melanosporum | 39416 | FALSE | |
| GSE48230 | GSE48230_PC3-EMT14_v_PC3-EMT14-OVOL1_isoform_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE81437 | GSE81437_polyA_differential_gene_expression.txt.gz | conservative | NA | NA | NA | NA | Rattus norvegicus | 10116 | FALSE | |
| GSE86442 | GSE86442_gene_differential_expression.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Transcript_SvvRv_Global.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE81493 | GSE81493_Differential_gene_expression_analysis.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE56013 | GSE56013_E.Wildtype_fatbody_DCVrel.Mock.txt.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE48230 | GSE48230_PC3-EMT14_v_PC3-EMT14-OVOL2_gene_exp.diff.txt.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE36710 | GSE36710_RBFOX1_Splicing_Events.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE95679 | GSE95679_Mishima_2017_Dcp2.txt.gz | conservative | NA | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE56013 | GSE56013_F.G9amutant_fatbody_DCVrel.Mock.txt.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE48230 | GSE48230_PC3-EMT14_v_PC3-EMT14-OVOL2_isoform_exp.diff.txt.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE35616 | GSE35616_DESeq.txt.gz | spiky | NA | anti-conservative | 0.87 | Mus musculus | 10090 | FALSE | ||
| GSE36710 | GSE36710_RBFOX1_Transcriptional_Events.txt.gz | bimodal | NA | anti-conservative | 1.00 | Homo sapiens | 9606 | FALSE | ||
| GSE87862 | GSE87862_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE94120 | GSE94120_K562pos_rel_abundance_1x1.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE83717 | GSE83717_FPKMs_pvalue_matrices.txt.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE85442 | GSE85442_cuffdiff.gene_exp_diff.allg.txt.gz | conservative | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE74220 | GSE74220_Expression_of_Protein_Coding_Genes_in_Control_and_IL1b_treated_human_chondrocytes.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE65697 | GSE65697_RNA-seq.csv.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE56013 | GSE56013_I.G9amutant_rel.to_Wildtype_DCV_WholeFly.txt.gz | spiky | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE63300 | GSE63300_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE58082 | GSE58082_gene_exp.diff.txt.gz | bimodal | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE49700 | GSE49700_aza.repeats.txt.gz | conservative | NA | NA | NA | NA | Tuber melanosporum | 39416 | FALSE | |
| GSE49313 | GSE49313_DRRi_GFPi_cds_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE49313 | GSE49313_DRRi_GFPi_cds_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE48230 | GSE48230_PC3-EMT14_v_PC3-Epi_gene_exp.diff.txt.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE94120 | GSE94120_SKNSHpos_rel_abundance_1x1.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE64641 | GSE64641_leaf_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Zea mays | 4577 | FALSE | |
| GSE85442 | GSE85442_cuffdiff.isoform_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE77902 | GSE77902_WM1976_siRNA1_vs_control.deseq.txt.gz | conservative | NA | anti-conservative | 0.78 | Homo sapiens | 9606 | FALSE | ||
| GSE56013 | GSE56013_J.G9amutant_rel.to_Wildtype_DCV_Fatbody.txt.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE59850 | GSE59850_redgrn_early_cuffdiff_out.diff.txt.gz | bimodal | NA | NA | NA | NA | Gallus gallus | 9031 | FALSE | |
| GSE49700 | GSE49700_aza.txt.gz | other | NA | NA | NA | NA | Tuber melanosporum | 39416 | FALSE | |
| GSE49313 | GSE49313_PhanDRR1.2_PhanGFP_cds_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE49313 | GSE49313_PhanDRR1.2_PhanGFP_cds_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE48230 | GSE48230_PC3-EMT14_v_PC3-Epi_isoform_exp.diff.txt.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE47399 | GSE47399_diff_exp_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE98869 | GSE98869_diffexp.tsv.gz | spiky | NA | other | NA | Caenorhabditis elegans | 6239 | FALSE | ||
| GSE75640 | GSE75640_HR1_vs_control_1_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE94843 | GSE94843_cuffdiff_mock_vs_lox.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE94120 | GSE94120_U2OS-PcTF_rel_abundance_1x3.txt.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE64641 | GSE64641_seedling_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Zea mays | 4577 | FALSE | |
| GSE85442 | GSE85442_cuffdiff.tss_group_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE77901 | GSE77901_SLNCR1_vs_vector.deseq.txt.gz | conservative | NA | anti-conservative | 0.65 | Homo sapiens | 9606 | FALSE | ||
| GSE70806 | GSE70806_rf6a_matrix.txt.gz | conservative | NA | NA | NA | NA | Macaca mulatta | 9544 | FALSE | |
| GSE68360 | GSE68360_cds.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE50554 | GSE50554_Routine_gene.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE75640 | GSE75640_HR2_vs_control_2_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE81707 | GSE81707_N2_HC125_RNA-seq_PairedEnd_gene_exp_diff.xlsx | conservative | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE94843 | GSE94843_cuffdiff_mock_vs_mnv.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE94120 | GSE94120_U2OSpos_rel_abundance_1x1.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE85863 | GSE85863_Galaxy238-_Cuffdiff_on_data_40__data_35_and_others_gene_differential_expression_testing.txt.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE77901 | GSE77901_SLNCR1cons_vs_vector.deseq.txt.gz | conservative | NA | anti-conservative | 0.92 | Homo sapiens | 9606 | FALSE | ||
| GSE80128 | GSE80128_P035_DESeq_KO-WT_pathway.txt.gz | bimodal | NA | anti-conservative | 0.80 | Mus musculus | 10090 | FALSE | ||
| GSE76125 | GSE76125_SenesUntreated_vs_SenesTreated_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE68360 | GSE68360_cds_exp.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE47083 | GSE47083_WTvsSclKO_WTvsGata12KO.xlsx.gz-set-0 | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE47083 | GSE47083_WTvsSclKO_WTvsGata12KO.xlsx.gz-set-1 | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE61845 | GSE61845_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE59850 | GSE59850_redgrn_late_cuffdiff_out.diff.txt.gz | bimodal | NA | NA | NA | NA | Gallus gallus | 9031 | FALSE | |
| GSE52502 | GSE52502_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE50554 | GSE50554_Routine_isoform.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE44333 | GSE44333_d33_mock_vs_mhv_res_noNA.txt.gz | bimodal | NA | anti-conservative | 0.96 | Mus musculus | 10090 | FALSE | ||
| GSE93748 | GSE93748_shTAZ_in_DU145_proceeded_data.xlsx | spiky | NA | anti-conservative | 0.91 | Homo sapiens | 9606 | FALSE | ||
| GSE81707 | GSE81707_N2_HC125_RNA-seq_SingleEnd_gene_exp_diff.xlsx | conservative | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE94821 | GSE94821_cuffdiff_mock_vs_12hpi.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE77422 | GSE77422_H358_Control-GNF5.xlsx-sheet-Sheet1 | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE67001 | GSE67001_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE77901 | GSE77901_SLNCR1deltacons_vs_vector.deseq.txt.gz | bimodal | NA | anti-conservative | 0.57 | Homo sapiens | 9606 | FALSE | ||
| GSE70314 | GSE70314_Gal474_cuffdiff_sictrl.1_siAtad2.1_gene_differential_expression_testing.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE68360 | GSE68360_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE61796 | GSE61796_NG_Induced_transcript_changes.txt.gz | conservative | NA | NA | NA | NA | Solanum tuberosum | 4113 | FALSE | |
| GSE50554 | GSE50554_Stringent_gene.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE49389 | GSE49389_RNAseq_gene_exp.txt.gz | conservative | NA | NA | NA | NA | Rattus norvegicus | 10116 | FALSE | |
| GSE93339 | GSE93339_e125_Yap-mt_lung_all_genes.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE85385 | GSE85385_RNA-seq_Mouse_Cell_Lines.xlsx-sheet-H3WT_EPZ_x_K27M_EPZ | other | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE94821 | GSE94821_cuffdiff_mock_vs_16hpi.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE77422 | GSE77422_PC9M_Control-GNF5.xlsx | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE77693 | GSE77693_deseq.comparison.csv.gz | spiky | NA | anti-conservative | 1.00 | Mus musculus | 10090 | FALSE | ||
| GSE68360 | GSE68360_isoform_exp.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE59850 | GSE59850_redrho_late_cuffdiff_out.diff.txt.gz | bimodal | NA | NA | NA | NA | Gallus gallus | 9031 | FALSE | |
| GSE50554 | GSE50554_Stringent_isoform.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE94821 | GSE94821_cuffdiff_mock_vs_20hpi.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE77422 | GSE77422_PC9M_SCR-AA.xlsx | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE75332 | GSE75332_Ad_AGGF1vsAd_NC.Differential_analysis_results.txt.gz | other | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE74893 | GSE74893_ctrl_and_Tsc1ckO_gene_exp.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE70314 | GSE70314_Gal476_cuffdiff_sictrl.1_siAtad2.1_transcript_differential_expression_testing.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE74196 | GSE74196_SnapC_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE68360 | GSE68360_promoters.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE54240 | GSE54240_phoP_RNA-seq.tsv.gz | bimodal | NA | NA | NA | NA | Mycobacterium tuberculosis H37Rv | 83332 | FALSE | |
| GSE94821 | GSE94821_cuffdiff_mock_vs_4hpi.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE77422 | GSE77422_PC9_Control-GNF5.xlsx | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE81593 | GSE81593_1.Mcf10A_p53delVec_and_p53delHras.xlsx | bimodal | NA | anti-conservative | 0.36 | Homo sapiens | 9606 | FALSE | ||
| GSE70833 | GSE70833_Rennoll_et_al_processed_data.xlsx-sheet-Cuffdiff | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE68360 | GSE68360_splicing.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE63133 | GSE63133_D.rerio_SVCV_infected__24K__vs_control_0K.txt.gz | conservative | NA | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE56052 | GSE56052_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE59850 | GSE59850_redvio_late_cuffdiff_out.diff.txt.gz | bimodal | NA | NA | NA | NA | Gallus gallus | 9031 | FALSE | |
| GSE57682 | GSE57682_Id2_3_Treg_G42_Cuffdiff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE57682 | GSE57682_Id2_3_Treg_G42_Cuffdiff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE89572 | GSE89572_24h_DEGs.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE88970 | GSE88970_Whsc1_proB_DE.xlsx-sheet-4P_05_WT_vs_KO_results | spiky | NA | anti-conservative | 0.88 | Mus musculus | 10090 | FALSE | ||
| GSE94821 | GSE94821_cuffdiff_mock_vs_8hpi.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE77422 | GSE77422_PC9_SCR-AA.xlsx | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE81593 | GSE81593_2.Mcf10A_Vec_and_Hras.xlsx | bimodal | NA | anti-conservative | 0.63 | Homo sapiens | 9606 | FALSE | ||
| GSE83827 | GSE83827_WT_vs_tf5.xlsx-sheet-gene_exp_diff | bimodal | NA | NA | NA | NA | Saccharomyces cerevisiae | 4932 | FALSE | |
| GSE70314 | GSE70314_Gal485_cuffdiff_sictrl.2_siAtad2.2_gene_differential_expression_testing.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE60630 | GSE60630_PDC3_vs_DMSO_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE56073 | GSE56073_PARP-1-KD_tss_group_exp.diff.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE71295 | GSE71295_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE63836 | GSE63836_Dx_versus_C15Dx.DESeq.txt.gz | bimodal | NA | anti-conservative | 0.83 | Mus musculus | 10090 | FALSE | ||
| GSE62668 | GSE62668_Embryo.txt.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE63133 | GSE63133_D.rerio_SVCV_infected__24S__vs_control_0S.txt.gz | conservative | NA | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE59980 | GSE59980_RNA-seq_598-SKD.txt.gz-set-0 | spiky | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE43660 | GSE43660_control_vs_IL4_1hr.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE36695 | GSE36695_H1H9KSR_SFM.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE36695 | GSE36695_H1H9KSR_SFM.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE89572 | GSE89572_2h_DEGs.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE71133 | GSE71133_Supplementary_Table_2.xlsx-sheet-FC > 0 | uniform | NA | other | NA | Mus musculus | 10090 | FALSE | ||
| GSE71133 | GSE71133_Supplementary_Table_2.xlsx-sheet-FC < 0 | uniform | NA | other | NA | Mus musculus | 10090 | FALSE | ||
| GSE60630 | GSE60630_PDC3_vs_DMSO_isoform_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE56073 | GSE56073_PARylation_tss_group_exp.diff.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE59621 | GSE59621_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE62668 | GSE62668_Sperm.txt.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE63133 | GSE63133_D.rerio_SVCV_infected__6K__vs_control_0K.txt.gz | conservative | NA | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE60171 | GSE60171_cuffdiff.FGF-1day.vs.iBET-1day.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE60171 | GSE60171_cuffdiff.FGF-1day.vs.iBET-1day.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE59850 | GSE59850_rhogrn_early_cuffdiff_out.diff.txt.gz | conservative | NA | NA | NA | NA | Gallus gallus | 9031 | FALSE | |
| GSE50739 | GSE50739_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE43660 | GSE43660_control_vs_IL4_4hr.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE36695 | GSE36695_H1H9KSR_hfSFM.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE36695 | GSE36695_H1H9KSR_hfSFM.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE89572 | GSE89572_7d_DEGs.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE98526 | GSE98526_A2_vs_UA159T5.txt.gz | other | NA | NA | NA | NA | Streptococcus mutans UA159 | 210007 | FALSE | |
| GSE94783 | GSE94783_rnaseq_process_cuffdiff_global_DMSO_Flut_PPC_genes_diff.tsv.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE70314 | GSE70314_Gal487_cuffdiff_sictrl.2_siAtad2.2_transcript_differential_expression_testing.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE60630 | GSE60630_PDC3_vs_DMSO_splicing.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE67029 | GSE67029_cuffdiff_mh_h8.txt.gz | bimodal | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE63133 | GSE63133_D.rerio_SVCV_infected__6S__vs_control_0S.txt.gz | conservative | NA | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE53470 | GSE53470_gene_exp_P251_PCJ_3rep_combined.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE60171 | GSE60171_cuffdiff.FGF-5days.vs.iBET-5days.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE60171 | GSE60171_cuffdiff.FGF-5days.vs.iBET-5days.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE43660 | GSE43660_control_vs_il33_1hr.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE36695 | GSE36695_H1KSR_H1SFM.txt.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE36695 | GSE36695_H1KSR_H1SFM.txt.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE94783 | GSE94783_rnaseq_process_cuffdiff_global_DMSO_Flut_genes_diff.tsv.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE71159 | GSE71159_E3KO_vs_EfCtrl_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE73893 | GSE73893_Results_DEXseq.txt.gz | uniform | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE54473 | GSE54473_Suv420_gene_exp.xlsx.gz-sheet-gene_exp | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE54473 | GSE54473_Suv420_gene_exp.xlsx.gz-sheet-gene_exp | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE53470 | GSE53470_gene_exp_P251_PJD_3rep_combined.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE54286 | GSE54286_Lys_sup_pelle_rs_mvhip_Exp.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE43660 | GSE43660_control_vs_il33_4hr.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE36695 | GSE36695_H1SFM_H9SFM.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE36695 | GSE36695_H1SFM_H9SFM.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE94783 | GSE94783_rnaseq_process_cuffdiff_global_DMSO_PPC_genes_diff.tsv.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE71159 | GSE71159_ECtrl_vs_E3KO_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE58115 | GSE58115_4858DM98-3_VS_4858C6_differential_all.txt.gz | bimodal | NA | NA | NA | NA | Streptomyces hygroscopicus subsp. jinggangensis 5008 | 1133850 | FALSE | |
| GSE36695 | GSE36695_H1SFM_hfSFM.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE36695 | GSE36695_H1SFM_hfSFM.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE35178 | GSE35178_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE79724 | GSE79724_DEseq_LG3-LG6-LG9_LG2-LG5-LG8_DEG_list.csv.gz | conservative | NA | other | NA | Homo sapiens | 9606 | FALSE | ||
| GSE89504 | GSE89504_TSS_groups_exp.tabular.txt.gz | bimodal | NA | NA | NA | NA | Acinetobacter baumannii ATCC 17978 | 400667 | FALSE | |
| GSE85328 | GSE85328_Leukaemia_MLL-AF9_RingKO.txt.gz | bimodal | NA | anti-conservative | 0.76 | Mus musculus | 10090 | FALSE | ||
| GSE81575 | GSE81575_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE71159 | GSE71159_ECtrl_vs_EfCtrl_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE72172 | GSE72172_S2_vs_SIN3_187.txt.gz | bimodal | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE36695 | GSE36695_H9KSR_H9SFM.txt.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE36695 | GSE36695_H9KSR_H9SFM.txt.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE35178 | GSE35178_isoform_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE34329 | GSE34329_processed_RNAseq_N_way_cuffdiff_combined_replicates_NIvIvPAvPS1145.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE79723 | GSE79723_DEseq_LG1401-LG437-LG8736_LG1405-LG435-LG8737_DEG_list.csv.gz | conservative | NA | anti-conservative | 0.89 | Mus musculus | 10090 | FALSE | ||
| GSE87307 | GSE87307_mRNA_processed_results.xlsx | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE62200 | GSE62200_Table_S4.xls.gz-sheet-Table S5 N2Y6-E VS LYP9-E | conservative | NA | NA | NA | NA | Oryza sativa | 4530 | FALSE | |
| GSE62200 | GSE62200_Table_S4.xls.gz-sheet-Table S4 | bimodal | NA | NA | NA | NA | Oryza sativa | 4530 | FALSE | |
| GSE36695 | GSE36695_H9KSR_hfSFM.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE36695 | GSE36695_H9KSR_hfSFM.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE34274 | GSE34274_Reads_Table_1_Original_RV_Mu1_RV_Mu3_RV_Wt1_RV_Wt2.expr.txt.gz-set-0 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE34274 | GSE34274_Reads_Table_1_Original_RV_Mu1_RV_Mu3_RV_Wt1_RV_Wt2.expr.txt.gz-set-1 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE34274 | GSE34274_Reads_Table_1_Original_RV_Mu1_RV_Mu3_RV_Wt1_RV_Wt2.expr.txt.gz-set-2 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE34274 | GSE34274_Reads_Table_1_Original_RV_Mu1_RV_Mu3_RV_Wt1_RV_Wt2.expr.txt.gz-set-3 | spiky | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE34274 | GSE34274_Reads_Table_1_Original_RV_Mu1_RV_Mu3_RV_Wt1_RV_Wt2.expr.txt.gz-set-4 | spiky | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE34274 | GSE34274_Reads_Table_1_Original_RV_Mu1_RV_Mu3_RV_Wt1_RV_Wt2.expr.txt.gz-set-5 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE81865 | GSE81865_RNAseq_uninjured-14dpi.txt.gz | bimodal | NA | anti-conservative | 0.46 | Danio rerio | 7955 | FALSE | ||
| GSE76453 | GSE76453_cuffdiff_E2.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE53599 | GSE53599_D5-1322_vs_RLuc-713_24hrs.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE36695 | GSE36695_H9SFM_hfSFM.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE36695 | GSE36695_H9SFM_hfSFM.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE97129 | GSE97129_CG9879_vs_WT_CuffDiff_Output_BDGP5.txt.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE83265 | GSE83265_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE89504 | GSE89504_gene_exp.tabular.txt.gz | bimodal | NA | NA | NA | NA | Acinetobacter baumannii ATCC 17978 | 400667 | FALSE | |
| GSE85950 | GSE85950_EHEC_plusminus_Symbioflor.xlsx | spiky | NA | NA | NA | NA | Escherichia coli O157:H7 str. EDL933 | 155864 | FALSE | |
| GSE76453 | GSE76453_cuffdiff_siCtl.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE75247 | GSE75247_processed_data.txt.gz-set-0 | spiky | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE75247 | GSE75247_processed_data.txt.gz-set-1 | spiky | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE69125 | GSE69125_10408_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE60441 | GSE60441_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE53599 | GSE53599_D5-1322_vs_RLuc-713_48hrs.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE97129 | GSE97129_Can_vs_WT_CuffDiff_Output_BDGP5.txt.gz | bimodal | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE83819 | GSE83819_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Aspergillus niger | 5061 | FALSE | |
| GSE85554 | GSE85554_deg_and_counts_table_new_read_counts.txt.gz | spiky | NA | other | NA | Danio rerio | 7955 | FALSE | ||
| GSE76453 | GSE76453_cuffdiff_siZNF143.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE77398 | GSE77398_ribo_cuffdiff_genes.xls.gz | bimodal | NA | NA | NA | NA | Plasmodium falciparum | 5833 | FALSE | |
| GSE66619 | GSE66619_DRG_Con_vs_Ips_mrna_gene_exp.diff.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE68813 | GSE68813_Woolnough2015_CuffDiff_RNA-seq.xlsx-sheet-rep1 CuffDiff Mock vs AGO2-KD | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE68813 | GSE68813_Woolnough2015_CuffDiff_RNA-seq.xlsx-sheet-rep1 CuffDiff Mock vs AGO2-KD | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE68813 | GSE68813_Woolnough2015_CuffDiff_RNA-seq.xlsx-sheet-rep2 CuffDiff Mock vs AGO2-KD | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE68813 | GSE68813_Woolnough2015_CuffDiff_RNA-seq.xlsx-sheet-rep2 CuffDiff Mock vs AGO2-KD | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE52284 | GSE52284_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Schizosaccharomyces pombe | 4896 | FALSE | |
| GSE53599 | GSE53599_D5-2086_vs_RLuc-713_24hrs.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87824 | GSE87824_processed_data.xlsx | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE97129 | GSE97129_Comr_vs_WT_CuffDiff_Output_BDGP5.txt.gz | bimodal | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE88700 | GSE88700_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87168 | GSE87168_Watson_et_al_TOXSCI-16-0457_Diff_Gen_Exp.csv.gz | conservative | NA | NA | NA | NA | Oryzias latipes | 8090 | FALSE | |
| GSE76453 | GSE76453_cuffdiff_veh.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE77862 | GSE77862_nhay_-_Alb-Cre.xlsx | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE65406 | GSE65406_control_vs_gld1_DESeq.csv.gz | conservative | NA | anti-conservative | 1.00 | Caenorhabditis elegans | 6239 | FALSE | ||
| GSE66619 | GSE66619_Dorsal_Cord_Ipsi_vs_Con_mrna_gene_exp.diff.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE63889 | GSE63889_Diff_0U_120U_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE53599 | GSE53599_D5-2086_vs_RLuc-713_48hrs.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE97129 | GSE97129_Mip40_vs_WT_CuffDiff_Output_BDGP5.txt.gz | bimodal | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE76257 | GSE76257_O-VG_OGS2.csv.gz | bimodal | NA | anti-conservative | 0.21 | Nasonia vitripennis | 7425 | FALSE | ||
| GSE83887 | GSE83887_gene_exp_Hyl-2_vs_Hyl-2-G.diff.gz | bimodal | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE78199 | GSE78199_Marsh_Cuffdiff_differential_gene_expression.txt.gz-set-0 | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE78199 | GSE78199_Marsh_Cuffdiff_differential_gene_expression.txt.gz-set-1 | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE78199 | GSE78199_Marsh_Cuffdiff_differential_gene_expression.txt.gz-set-2 | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE78199 | GSE78199_Marsh_Cuffdiff_differential_gene_expression.txt.gz-set-3 | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE78199 | GSE78199_Marsh_Cuffdiff_differential_gene_expression.txt.gz-set-4 | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE78199 | GSE78199_Marsh_Cuffdiff_differential_gene_expression.txt.gz-set-5 | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE65406 | GSE65406_gld1_vs_tumorfast_DESeq.csv.gz | conservative | NA | other | NA | Caenorhabditis elegans | 6239 | FALSE | ||
| GSE63889 | GSE63889_Diff_120U_120C_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE53653 | GSE53653_st10.5_Foxh1_MO_gene_exp_diff.txt.gz | conservative | NA | NA | NA | NA | Xenopus tropicalis | 8364 | FALSE | |
| GSE33265 | GSE33265_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Oryza sativa | 4530 | FALSE | |
| GSE83887 | GSE83887_gene_exp_N2_vs_Hyl-2.diff.gz | bimodal | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE83584 | GSE83584_processed_data_Day0.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE65406 | GSE65406_gld1_vs_tumorfed_DESeq.csv.gz | conservative | NA | other | NA | Caenorhabditis elegans | 6239 | FALSE | ||
| GSE63485 | GSE63485_KS_J1Csh63_vs_KS_CTRL.two_replicates.all_gene_exp.tbl.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73077 | GSE73077_fpkm_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE53653 | GSE53653_st10.5_SB431542_gene_exp_diff.txt.gz | conservative | NA | NA | NA | NA | Xenopus tropicalis | 8364 | FALSE | |
| GSE52551 | GSE52551_delta_Rv3263_expr.txt.gz | other | NA | NA | NA | NA | Mycobacterium tuberculosis H37Rv | 83332 | FALSE | |
| GSE46066 | GSE46066_ICRFVsDMSO.txt.gz | bimodal | NA | anti-conservative | 0.79 | Mus musculus | 10090 | FALSE | ||
| GSE33265 | GSE33265_isoform_exp.diff.gz | bimodal | NA | NA | NA | NA | Oryza sativa | 4530 | FALSE | |
| GSE83567 | GSE83567_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE83887 | GSE83887_gene_exp_N2_vs_N2G.diff.gz | bimodal | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE77034 | GSE77034_aza_vs_PBS.gene_exp.tsv.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE83584 | GSE83584_processed_data_Day3_5.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE77793 | GSE77793_gene_exp_diff_fc_hepatocytes_DMSO_GL_TamerSallam_122012.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE65406 | GSE65406_tumorfed_vs_tumorfast_DESeq.csv.gz | conservative | NA | other | NA | Caenorhabditis elegans | 6239 | FALSE | ||
| GSE63485 | GSE63485_KS_J1Csh95_vs_KS_CTRL.two_replicates.all_gene_exp.tbl.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE71369 | GSE71369_Processed_data_GRO_seq.xlsx-sheet-untethered_vs_tethered_RPM | bimodal | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE71369 | GSE71369_Processed_data_GRO_seq.xlsx-sheet-untethered_vs_tethered_RPM | bimodal | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE60756 | GSE60756_Richards_092013_B6_vs_Cast_DESeq_Stats-NormSignal_Annotated.txt.gz | uniform | NA | spiky | NA | Mus musculus | 10090 | FALSE | ||
| GSE85402 | GSE85402_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE81251 | GSE81251_Kdm6a_def_mouse_expression_value.xlsx | spiky | NA | uniform | NA | Mus musculus | 10090 | FALSE | ||
| GSE86837 | GSE86837_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE60177 | GSE60177_PseudomonasDESeq.txt.gz | conservative | NA | NA | NA | NA | Pseudomonas aeruginosa PAO1 | 208964 | FALSE | |
| GSE77034 | GSE77034_aza_vs_vc.gene_exp.tsv.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE80135 | GSE80135_Lipo_siProx_sig_results.csv.gz | spiky | NA | anti-conservative | 0.73 | Homo sapiens | 9606 | FALSE | ||
| GSE65406 | GSE65406_youngadults_vs_gld1_DESeq.csv.gz | conservative | NA | anti-conservative | 1.00 | Caenorhabditis elegans | 6239 | FALSE | ||
| GSE76627 | GSE76627_CNBP-cuffdif.xlsx.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE63485 | GSE63485_shAML1_ETO_vs_shControl.all_gene_exp.tbl.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE66575 | GSE66575_RNAseq_genes_expression.xlsx-sheet-control_vs_comparison.gene_exp | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE66575 | GSE66575_RNAseq_genes_expression.xlsx-sheet-control_vs_comparison.isoform_e | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE65408 | GSE65408_processed_data_file.csv.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE40548 | GSE40548_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE40548 | GSE40548_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE38414 | GSE38414_Maize_Silks_mRNA-Seq_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Zea mays | 4577 | FALSE | |
| GSE89168 | GSE89168_36hpupalCNS_WT_dStimKD_CuffDiff.txt.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE91060 | GSE91060_E11_vs._E16.xls.gz | bimodal | NA | NA | NA | NA | Gallus gallus | 9031 | FALSE | |
| GSE87240 | GSE87240_gene_expnorliver.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE83405 | GSE83405_geneExpDiffData_E14_cells_pnldc1_silencing.xlsx-sheet-Φύλλο1 | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE77034 | GSE77034_combo_vs_PBS.gene_exp.tsv.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE85321 | GSE85321_Supplemental_Table_2_YAD_RNA_seq_.xls.gz-sheet-YAD_Diff analysis | bimodal | NA | NA | NA | NA | Saccharomyces cerevisiae | 4932 | FALSE | |
| GSE80135 | GSE80135_siNeg_Lipo_results.csv.gz | spiky | NA | anti-conservative | 0.77 | Homo sapiens | 9606 | FALSE | ||
| GSE74131 | GSE74131_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE75832 | GSE75832_DifferentialExpression_groupwise_comparisons.xlsx-sheet-P14_P2_gene_exp_up | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE75832 | GSE75832_DifferentialExpression_groupwise_comparisons.xlsx-sheet-P14_P7_gene_exp_up | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE75832 | GSE75832_DifferentialExpression_groupwise_comparisons.xlsx-sheet-P14_P7_gene_exp_down | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE75832 | GSE75832_DifferentialExpression_groupwise_comparisons.xlsx-sheet-P7_P2_gene_exp_up | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE75832 | GSE75832_DifferentialExpression_groupwise_comparisons.xlsx-sheet-P7_P2_gene_exp_down | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE46486 | GSE46486_young_old_deseq.txt.gz | conservative | NA | spiky | NA | Homo sapiens | 9606 | FALSE | ||
| GSE91060 | GSE91060_E11_vs._P1.xlsx | bimodal | NA | NA | NA | NA | Gallus gallus | 9031 | FALSE | |
| GSE84145 | GSE84145_E12.5RET_WT_NULL.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87240 | GSE87240_gene_expsk.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE77034 | GSE77034_combo_vs_aza.gene_exp.tsv.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE85321 | GSE85321_Supplemental_Table_3_YGD_RNA_seq_.xls.gz-sheet-YGD_Diff analysis | bimodal | NA | NA | NA | NA | Saccharomyces cerevisiae | 4932 | FALSE | |
| GSE80135 | GSE80135_siNeg_siProx_SC_results.csv.gz | spiky | NA | anti-conservative | 0.78 | Homo sapiens | 9606 | FALSE | ||
| GSE67063 | GSE67063_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Chlorocebus sabaeus | 60711 | FALSE | |
| GSE75832 | GSE75832_DifferentialExpression_withingroup.xlsx-sheet-P2_1_P2_3_gene_exp_up | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE75832 | GSE75832_DifferentialExpression_withingroup.xlsx-sheet-P2_1_P2_3_gene_exp_down | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE75832 | GSE75832_DifferentialExpression_withingroup.xlsx-sheet-P7_1_P7_2_gene_exp_up | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE75832 | GSE75832_DifferentialExpression_withingroup.xlsx-sheet-P7_1_P7_2_gene_exp_down | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE75832 | GSE75832_DifferentialExpression_withingroup.xlsx-sheet-P14_2_P14_3_gene_exp_up | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE75832 | GSE75832_DifferentialExpression_withingroup.xlsx-sheet-P14_2_P14_3_gene_exp_down | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE55394 | GSE55394_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE63758 | GSE63758_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE44831 | GSE44831_BALBfabD1_BALBmockD1_24hr_post_expr.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE38413 | GSE38413_Maize_Pericarp_14DAP_mRNA-Seq_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Zea mays | 4577 | FALSE | |
| GSE99347 | GSE99347_H2AfZKO_WT.anno.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE89168 | GSE89168_72hpupalCNS_WT_dStimKD+Recovery_CuffDiff.txt.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE92345 | GSE92345_H9_I_pqvalues.poisson.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE92345 | GSE92345_H9_I_pqvalues.poisson.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE92345 | GSE92345_H9_I_pqvalues.poisson.txt.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | TRUE | |
| GSE91060 | GSE91060_E16_vs._P1.xlsx | bimodal | NA | NA | NA | NA | Gallus gallus | 9031 | FALSE | |
| GSE87240 | GSE87240_hep_gene_exphep.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE77034 | GSE77034_combo_vs_vc.gene_exp.tsv.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE68736 | GSE68736_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE79822 | GSE79822_Deseq_totalRNA.txt.gz | bimodal | NA | anti-conservative | 0.46 | Caenorhabditis elegans | 6239 | FALSE | ||
| GSE64185 | GSE64185_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE51893 | GSE51893_wt_v_MZeomesa-sphere_gene_exp.txt.gz | conservative | NA | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE60825 | GSE60825_Differential_Expression.xlsx-sheet-Cntrl Hypoxia vs ELT-2 Hypoxia | conservative | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE60825 | GSE60825_Differential_Expression.xlsx-sheet-Cntrl Hypoxia vs ELT-2 Normoxia | conservative | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE60825 | GSE60825_Differential_Expression.xlsx-sheet-Cntrl Normoxia vs Cntrl Hypoxia | conservative | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE60825 | GSE60825_Differential_Expression.xlsx-sheet-Cntrl Normoxia vs ELT-2 Hypoxia | conservative | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE60825 | GSE60825_Differential_Expression.xlsx-sheet-Cntl Normoxia vs ELT-2 Normoxia | conservative | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE60825 | GSE60825_Differential_Expression.xlsx-sheet-ELT-Normoxia vs ELT-2 Hypoxia | conservative | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE44831 | GSE44831_BALBfabD1_BALBmockD1_exp.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE92345 | GSE92345_H9_P_pqvalues.poisson.txt.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE92345 | GSE92345_H9_P_pqvalues.poisson.txt.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE92345 | GSE92345_H9_P_pqvalues.poisson.txt.gz | bimodal | NA | NA | NA | NA | Drosophila melanogaster | 7227 | TRUE | |
| GSE77034 | GSE77034_vc_vs_PBS.gene_exp.tsv.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE85321 | GSE85321_Supplemental_Table_5_YAR_RNA_seq_.xls.gz-sheet-YAR diff. analysis | bimodal | NA | NA | NA | NA | Saccharomyces cerevisiae | 4932 | FALSE | |
| GSE79822 | GSE79822_cuffdiffs_mRNA.txt.gz | conservative | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE63794 | GSE63794_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE44831 | GSE44831_BALBfab_BALBmj_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE38413 | GSE38413_Maize_Pericarp_25DAP_mRNA-Seq_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Zea mays | 4577 | FALSE | |
| GSE96814 | GSE96814_Deseq2_MS2RsaA.xlsx-sheet-Feuil1 | other | NA | other | NA | Staphylococcus aureus | 1280 | FALSE | ||
| GSE92345 | GSE92345_HEK_I_pqvalues.poisson.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE92345 | GSE92345_HEK_I_pqvalues.poisson.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE92345 | GSE92345_HEK_I_pqvalues.poisson.txt.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | TRUE | |
| GSE77032 | GSE77032_aza_vs_PBS.gene_exp.tsv.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE85321 | GSE85321_Supplemental_Table_6_JHD2_OE_YAD_.xls.gz-sheet-OE_EV_YAD_Diff analysis | conservative | NA | NA | NA | NA | Saccharomyces cerevisiae | 4932 | FALSE | |
| GSE74381 | GSE74381_gene_exp_control2vsZeb2cKO2diff.xlsx | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE80068 | GSE80068_col_dms3_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE70728 | GSE70728_KDM2B_RNAseq_DEG.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE69721 | GSE69721_UP-_and_Down-regulated_genes.txt.gz | bimodal | NA | NA | NA | NA | Haemaphysalis flava | 181088 | FALSE | |
| GSE64544 | GSE64544_LV_processed.txt.gz | conservative | NA | NA | NA | NA | Canis lupus familiaris | 9615 | FALSE | |
| GSE42805 | GSE42805_acute_gene.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE44831 | GSE44831_C57BL6fabD1_C57BL6mockD1_24hr_post_expr.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE96814 | GSE96814_Deseq_TotRNA.xlsx-sheet-Feuil1 | other | NA | other | NA | Staphylococcus aureus | 1280 | FALSE | ||
| GSE92345 | GSE92345_HEK_P_pqvalues.poisson.txt.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE92345 | GSE92345_HEK_P_pqvalues.poisson.txt.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE92345 | GSE92345_HEK_P_pqvalues.poisson.txt.gz | bimodal | NA | NA | NA | NA | Drosophila melanogaster | 7227 | TRUE | |
| GSE77032 | GSE77032_aza_vs_vc.gene_exp.tsv.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE85321 | GSE85321_Supplemental_Table_7_JHD2_OE_YAR_.xls.gz-sheet-OE_EV_YAR_Diff analysis | conservative | NA | NA | NA | NA | Saccharomyces cerevisiae | 4932 | FALSE | |
| GSE78834 | GSE78834_gene_expression_profiles.txt.gz | bimodal | NA | NA | NA | NA | Desulfovibrio vulgaris | 881 | FALSE | |
| GSE80068 | GSE80068_col_h2h9_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE64544 | GSE64544_MV_processed.txt.gz | conservative | NA | NA | NA | NA | Canis lupus familiaris | 9615 | FALSE | |
| GSE62647 | GSE62647_Setd8_differential_expression_analyses.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE47395 | GSE47395_gene_exp.diff.anno.known.csv.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE42805 | GSE42805_cds.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE52385 | GSE52385_siCtrl_VS_siSRA_assemblenewgenes.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE44831 | GSE44831_C57BL6fabD1_C57BL6mockD1_exp.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87890 | GSE87890_vgat1_csv.csv.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE92874 | GSE92874_RNA.txt.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE95181 | GSE95181_HNS_counts_and_DGE.txt.gz | bimodal | NA | NA | NA | NA | Mycobacterium tuberculosis H37Rv | 83332 | FALSE | |
| GSE66155 | GSE66155_regulation.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE77032 | GSE77032_combo_vs_PBS.gene_exp.tsv.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE80707 | GSE80707_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE78527 | GSE78527_siSNRNP40_siControl_processed.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE80068 | GSE80068_col_nrpe1_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE42805 | GSE42805_cds_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE52385 | GSE52385_siCtrl_VS_siSRA_notassemblenewgenes.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE46807 | GSE46807_GEO_values_TAF4_RNAseq_Tophat.Cufflinks_mm9_WeiYi.txt.gz-set-0 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE46807 | GSE46807_GEO_values_TAF4_RNAseq_Tophat.Cufflinks_mm9_WeiYi.txt.gz-set-1 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE46807 | GSE46807_GEO_values_TAF4_RNAseq_Tophat.Cufflinks_mm9_WeiYi.txt.gz-set-2 | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE44831 | GSE44831_C57BLfab_C57BLmj_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87890 | GSE87890_vgat2_csv.csv.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE79677 | GSE79677_Crossbred_vs._Purebred_comparison_group.tabular.txt.gz | conservative | NA | NA | NA | NA | Bos taurus | 9913 | FALSE | |
| GSE78965 | GSE78965_C57Bl6_MCS_vs_FST_acute_gene_differential_expression_testing.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE77032 | GSE77032_combo_vs_aza.gene_exp.tsv.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE71916 | GSE71916_Expression_Cufflinks_siRbfox1_3+Flag-Rbfox1_C_compared_to_siRbfox1_3+EGFP.txt.gz | other | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE67787 | GSE67787_con_bps_wex_RNAseq_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Rattus norvegicus | 10116 | FALSE | |
| GSE70283 | GSE70283_cuffdiff_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE66506 | GSE66506_DE_analysis_010714.xlsx-sheet-All_Genes | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE42805 | GSE42805_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE52450 | GSE52450_Cuffdiff_on_pre-pro-B_and_pro-B_aligned_reads_transcript_differential_expression_testing_Bv46.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE44831 | GSE44831_matrix_BALB_C57BL.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE36872 | GSE36872_NascentSeq_Mouse_Liver_NormalizedGeneSignal.txt.gz | spiky | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87890 | GSE87890_vglut1_csv.csv.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE98875 | GSE98875_Diff.summary.xlsx-sheet-all_genes | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE96072 | GSE96072_Galaxy106-_Cuffdiff_on_data_40__data_39_and_others_transcript_differential_expression_testing.tabular.txt.gz | bimodal | NA | NA | NA | NA | Enterococcus faecalis | 1351 | FALSE | |
| GSE79677 | GSE79677_One_by_one_comparisons.tabular.txt.gz | conservative | NA | NA | NA | NA | Bos taurus | 9913 | FALSE | |
| GSE78965 | GSE78965_C57Bl6_MCS_vs_FST_chronic_gene_differential_expression_testing.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE77032 | GSE77032_combo_vs_vc.gene_exp.tsv.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73083 | GSE73083_3F_Lef1_PlusversusMinusDOX_ProcessedFiles.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE79416 | GSE79416_new-lncRNA_transcript_output.xls.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE71916 | GSE71916_Expression_Cufflinks_siRbfox1_3+Flag-Rbfox1_N_compared_to_siRbfox1_3+EGFP.txt.gz | other | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE66478 | GSE66478_gene_exp.txt.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE55090 | GSE55090_cds_exp.diff.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE42805 | GSE42805_isoform_exp.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE50068 | GSE50068_Cuffdiff_output.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE36871 | GSE36871_RNASeq_Mouse_Liver_NormalizedGeneSignal.txt.gz | spiky | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87890 | GSE87890_vglut2_csv.csv.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE82164 | GSE82164_Cuffdiff_gene_differential_expression_testing.tabular.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE96072 | GSE96072_Galaxy24-_Cuffdiff_on_data_7__data_6_and_others_transcript_differential_expression_testing.tabular.txt.gz | bimodal | NA | NA | NA | NA | Enterococcus faecalis | 1351 | FALSE | |
| GSE77032 | GSE77032_vc_vs_PBS.gene_exp.tsv.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE77351 | GSE77351_Farshchian.txt.gz | spiky | NA | anti-conservative | 0.89 | Mus musculus | 10090 | FALSE | ||
| GSE73082 | GSE73082_F_Sp5_PlusversusMinusDOX_ProcessedFiles.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE77218 | GSE77218_A3_A2.xlsx-sheet-express | bimodal | NA | NA | NA | NA | Vitis vinifera | 29760 | FALSE | |
| GSE70766 | GSE70766_Differential_expression.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE70766 | GSE70766_Differential_expression.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE68160 | GSE68160_GRdim-RNASeq.xlsx | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE66478 | GSE66478_isoform_exp.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE55090 | GSE55090_gene_exp.diff.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE42805 | GSE42805_promoters.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE44846 | GSE44846_O157_genome_total.xlsx.gz-sheet-Sheet1 | bimodal | NA | NA | NA | NA | Escherichia coli O157:H7 | 83334 | FALSE | |
| GSE33141 | GSE33141_TopHatTranscriptsFPKM.xls.gz-sheet-mRNA-Transcripts-FPKM | other | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE33141 | GSE33141_TopHatTranscriptsFPKM.xls.gz-sheet-Pseudogenes-FPKM | other | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87890 | GSE87890_vglut3_csv.csv.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE96072 | GSE96072_Galaxy55-_Cuffdiff_on_data_2__data_4_and_others_transcript_differential_expression_testing.tabular.txt.gz | bimodal | NA | NA | NA | NA | Enterococcus faecalis | 1351 | FALSE | |
| GSE76771 | GSE76771_ALL_gene_expression.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE77218 | GSE77218_A4_A2.xlsx-sheet-express | bimodal | NA | NA | NA | NA | Vitis vinifera | 29760 | FALSE | |
| GSE70711 | GSE70711_IRF4hi.vs.IRF8hi.gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE55870 | GSE55870_CAF90vsNF1493.xlsx.gz | conservative | NA | other | NA | Mus musculus | 10090 | FALSE | ||
| GSE55090 | GSE55090_isoform_exp.diff.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE42805 | GSE42805_splicing.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE82164 | GSE82164_Cuffdiff_transcript_differential_expression_testing.tabular.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE58467 | GSE58467_FPKM.txt.gz | bimodal | NA | NA | NA | NA | Enterococcus faecalis | 1351 | FALSE | |
| GSE80370 | GSE80370_col_morc6_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE80370 | GSE80370_col_morc6_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE77218 | GSE77218_A4_A3.xlsx-sheet-express | bimodal | NA | NA | NA | NA | Vitis vinifera | 29760 | FALSE | |
| GSE70711 | GSE70711_IRF8cKO_GCBCell_RPKM_exp_1.csv.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE56966 | GSE56966_IL6Ra_WT.xlsx.gz-sheet-gene_exp | other | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE56966 | GSE56966_IL6Ra_WT.xlsx.gz-sheet-gene_notest | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE55090 | GSE55090_tss_group_exp.diff.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE42805 | GSE42805_tss_group_exp.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE83560 | GSE83560_degTest_byCuffdiff.xlsx-sheet-T_11_12_P-T_11_12_C | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE83560 | GSE83560_degTest_byCuffdiff.xlsx-sheet-T_11_19_1_P-T_11_19_1_C | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE83560 | GSE83560_degTest_byCuffdiff.xlsx-sheet-T_72_P-T_72_C | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE79408 | GSE79408_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE90876 | GSE90876_Cuffdiff_PSM_vs_SM.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE77113 | GSE77113_GC_WT_vs_Hdac3KO.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE80370 | GSE80370_col_suvh2suvh9_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE80370 | GSE80370_col_suvh2suvh9_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE70711 | GSE70711_IRF8cKO_GCBCell_RPKM_exp_2.csv.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE67437 | GSE67437_KO-ILC2-mLN_021815_vs_WT-ILC2-mLN_021815.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE56966 | GSE56966_MyD88_WT.xlsx.gz-sheet-gene_exp | other | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE56966 | GSE56966_MyD88_WT.xlsx.gz-sheet-gene_notest | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE51975 | GSE51975_C_v_OVOL1_2_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE81055 | GSE81055_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE90876 | GSE90876_Cuffdiff_SM_vs_SM_Dev.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE92246 | GSE92246_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Schizosaccharomyces pombe | 4896 | FALSE | |
| GSE81114 | GSE81114_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Rattus norvegicus | 10116 | FALSE | |
| GSE77113 | GSE77113_Hdac3KO_non-GC_vs_GC.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE77675 | GSE77675_Old_vs_Young_isoforms_expression.txt.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE71527 | GSE71527_KO_SNI_Sal_vs_KO_SNI_DMI.xlsx | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE60642 | GSE60642_AB056_2.xlsx.gz-set-0 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE60642 | GSE60642_AB056_2.xlsx.gz-set-1 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE60642 | GSE60642_AB056_2.xlsx.gz-set-2 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE59017 | GSE59017_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE57396 | GSE57396_Cuttdiff_cds_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE51975 | GSE51975_C_v_OVOL1_2_isoform_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE81055 | GSE81055_gene_exp.diff_bias.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE77229 | GSE77229_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE95234 | GSE95234_IPInputFPKM.xlsx | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE79633 | GSE79633_DESeq2_out_FO_GFP_vs_WT.txt.gz | spiky | NA | anti-conservative | 0.77 | Mus musculus | 10090 | FALSE | ||
| GSE77113 | GSE77113_WT_non-GC_vs_GC.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE71527 | GSE71527_KO_naive_vs_KO_SNI_Sal.xlsx | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE68806 | GSE68806_Galaxy_data_Cuffdiff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE67335 | GSE67335_LEF1_Th1.Vs.pMIG_Th1.DESeq_Analysis_DE_Genes.txt.gz | other | NA | other | NA | Mus musculus | 10090 | FALSE | ||
| GSE60641 | GSE60641_AB03_2.xlsx.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE57227 | GSE57227_PHH_GW_vs_DMSO_RNA_seq_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE59017 | GSE59017_isoform_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE51975 | GSE51975_C_v_OVOL1_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE84301 | GSE84301_Pub_vs_Prepub.Differential_analysis_results.txt.gz | conservative | NA | NA | NA | NA | Capra hircus | 9925 | FALSE | |
| GSE95234 | GSE95234_NotInfectedInfectedFPKM.xlsx-set-0 | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE95234 | GSE95234_NotInfectedInfectedFPKM.xlsx-set-1 | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE77113 | GSE77113_non-GC_WT_vs_Hdac3KO.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE86202 | GSE86202_1_TreatVSControl_circRNA_differential_expression.xlsx | spiky | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE71527 | GSE71527_WT_SNI_DMI_vs_KO_SNI_DMI.xlsx | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE61351 | GSE61351_Cont_ComparedTo_PTH_D28_CuffDiffAnalysis1.xls.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE64757 | GSE64757_All_FPKMs_GEO.csv.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE54433 | GSE54433_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Saccharomyces cerevisiae | 4932 | FALSE | |
| GSE51975 | GSE51975_C_v_OVOL1_isoform_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE34097 | GSE34097_aff2_genes_cufflinks.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE97256 | GSE97256_Y1differentialGenes.tab.gz | conservative | NA | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE63224 | GSE63224_All_unigene_expression.txt.gz-set-0 | other | NA | NA | NA | NA | Fragaria x ananassa | 3747 | FALSE | |
| GSE63224 | GSE63224_All_unigene_expression.txt.gz-set-1 | other | NA | NA | NA | NA | Fragaria x ananassa | 3747 | FALSE | |
| GSE63224 | GSE63224_All_unigene_expression.txt.gz-set-2 | other | NA | NA | NA | NA | Fragaria x ananassa | 3747 | FALSE | |
| GSE63224 | GSE63224_All_unigene_expression.txt.gz-set-3 | other | NA | NA | NA | NA | Fragaria x ananassa | 3747 | FALSE | |
| GSE63224 | GSE63224_All_unigene_expression.txt.gz-set-4 | other | NA | NA | NA | NA | Fragaria x ananassa | 3747 | FALSE | |
| GSE79758 | GSE79758_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE76868 | GSE76868_Table_S1_RNA-seq.xlsx | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE71527 | GSE71527_WT_SNI_Sal_vs_KO_SNI_Sal.xlsx | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE63810 | GSE63810_BCKO_RNASeq_Data.xlsx-sheet-GenesDiffExp | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE51975 | GSE51975_C_v_OVOL2_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE34097 | GSE34097_aff3_genes_cufflinks.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE83828 | GSE83828_Gene_expression_data.xlsx | bimodal | NA | NA | NA | NA | Cyanidioschyzon merolae | 45157 | FALSE | |
| GSE86202 | GSE86202_Gene_differential_expression.xlsx | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE80718 | GSE80718_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Linum usitatissimum | 4006 | FALSE | |
| GSE73940 | GSE73940_cuffdiff.gene_exp.diff.gz | conservative | NA | NA | NA | NA | Gallus gallus | 9031 | FALSE | |
| GSE71527 | GSE71527_WT_SNI_Sal_vs_WT_SNI_DMI.xlsx | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE51975 | GSE51975_C_v_OVOL2_isoform_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE44536 | GSE44536_GEO_Processed_file_excel.xlsx.gz-sheet-FPKM_NC_009338 | bimodal | NA | NA | NA | NA | Mycolicibacterium gilvum PYR-GCK | 350054 | FALSE | |
| GSE34097 | GSE34097_aff4_genes_cufflinks.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE54641 | GSE54641_DESeq.txt.gz | conservative | NA | anti-conservative | 0.98 | Homo sapiens | 9606 | FALSE | ||
| GSE80349 | GSE80349_results.txt.gz-set-1 | conservative | NA | NA | NA | NA | Schizosaccharomyces pombe | 4896 | FALSE | |
| GSE73940 | GSE73940_cuffdiff.isoform_exp.diff.gz | conservative | NA | NA | NA | NA | Gallus gallus | 9031 | FALSE | |
| GSE71527 | GSE71527_WT_naive_vs_KO_naive.xlsx | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE71252 | GSE71252_Akdogan_RNASeq_Cuffdiff_JUL232015.xlsx-sheet-geneExpDiffData | bimodal | NA | NA | NA | NA | Saccharomyces cerevisiae | 4932 | FALSE | |
| GSE71252 | GSE71252_Akdogan_RNASeq_Cuffdiff_JUL232015.xlsx-sheet-isoformExpDiffData | bimodal | NA | NA | NA | NA | Saccharomyces cerevisiae | 4932 | FALSE | |
| GSE65025 | GSE65025_WT-HSF_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Oryza sativa Japonica Group | 39947 | FALSE | |
| GSE54641 | GSE54641_cuffdiff2_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE61969 | GSE61969_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE61969 | GSE61969_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE55682 | GSE55682_16h.xls.gz | other | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE72105 | GSE72105_Differential_Gene_Expression_Summary_D0.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE72994 | GSE72994_cds_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE71527 | GSE71527_WT_naive_vs_WT_SNI_Sal.xlsx | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE59481 | GSE59481_PIG_vs_GFP_DE_genes.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE65024 | GSE65024_WT-bhlh_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Oryza sativa Japonica Group | 39947 | FALSE | |
| GSE61238 | GSE61238_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE58326 | GSE58326_gene_exp.txt.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE41908 | GSE41908_E11.5_E13.5f_cuffdiff1.2.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE98759 | GSE98759_gene_exp.txt.gz | other | NA | other | NA | Mus musculus | 10090 | FALSE | ||
| GSE76865 | GSE76865_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE81059 | GSE81059_cns-control_vs_cns-hh.csv.gz | conservative | NA | other | NA | Schmidtea mediterranea | 79327 | FALSE | ||
| GSE55682 | GSE55682_20h.xls.gz | other | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE72105 | GSE72105_Differential_Gene_Expression_Summary_D6.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE72994 | GSE72994_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE65328 | GSE65328_A17_6V.tab.gz | conservative | NA | anti-conservative | 0.92 | Medicago truncatula | 3880 | FALSE | ||
| GSE65022 | GSE65022_cuffdiff-WT_CD_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Oryza sativa Japonica Group | 39947 | FALSE | |
| GSE41908 | GSE41908_E11.5_E13.5m_cuffdiff1.2.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE93280 | GSE93280_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE76864 | GSE76864_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE81059 | GSE81059_cns-control_vs_cns-ptc.csv.gz | conservative | NA | other | NA | Schmidtea mediterranea | 79327 | FALSE | ||
| GSE86159 | GSE86159_significance_calls_genes_overexpression.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE55682 | GSE55682_24h.xls.gz | other | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE72105 | GSE72105_Differential_Gene_Expression_Summary_myotubes.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE72994 | GSE72994_isoform_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE59020 | GSE59020_ETS1_gene_exp_all.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE41908 | GSE41908_E9.5_E11.5_cuffdiff1.2.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE95481 | GSE95481_GCN5_RNAi_vs_WT_root_tip_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Oryza sativa Japonica Group | 39947 | FALSE | |
| GSE86159 | GSE86159_significance_calls_genes_tam_timecourse.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE78902 | GSE78902_DEseq_DB001-DB004_DB002-DB003_DEG_list.csv.gz | other | NA | other | NA | Mus musculus | 10090 | FALSE | ||
| GSE78996 | GSE78996_CTR_vs_EAE_Cuffdiff_analysis.xlsx | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE55682 | GSE55682_48h.xls.gz | other | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE53040 | GSE53040_wtDMSOvswtD1.txt.gz | bimodal | NA | NA | NA | NA | Neurospora crassa | 5141 | FALSE | |
| GSE72105 | GSE72105_Differential_Gene_Expression_Summary_usp10.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE72994 | GSE72994_promoters.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE59020 | GSE59020_U0126_gene_exp_all.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE89110 | GSE89110_RNAseq_shPFKB4_p53_logFC.txt.gz-set-0 | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE89110 | GSE89110_RNAseq_shPFKB4_p53_logFC.txt.gz-set-1 | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE89110 | GSE89110_RNAseq_shPFKB4_p53_logFC.txt.gz-set-2 | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE89110 | GSE89110_RNAseq_shPFKB4_p53_logFC.txt.gz-set-3 | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE95481 | GSE95481_GCN5_RNAi_vs_WT_whole_root_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Oryza sativa Japonica Group | 39947 | FALSE | |
| GSE95850 | GSE95850_RUCA-I_WT_vs_miR-203_KO_gene_expression.csv.gz | other | NA | NA | NA | NA | Rattus norvegicus | 10116 | FALSE | |
| GSE86187 | GSE86187_p0wt-ko-gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE93280 | GSE93280_isoform_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE72762 | GSE72762_DEseq_LS023-LS024-LS025_LS030-LS031-LS032_DEG_list.txt.gz | conservative | NA | other | NA | Mus musculus | 10090 | FALSE | ||
| GSE72059 | GSE72059_21_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE55682 | GSE55682_Baf250a6days.csv.gz | other | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE53040 | GSE53040_wtDMSOvswtTX129.txt.gz | conservative | NA | NA | NA | NA | Neurospora crassa | 5141 | FALSE | |
| GSE72994 | GSE72994_tss_group_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE69113 | GSE69113_AIPVUIP_differential_expression.txt.gz | other | NA | NA | NA | NA | Sus scrofa | 9823 | FALSE | |
| GSE47095 | GSE47095_splicing_diff.txt.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE86187 | GSE86187_p6wt-ko_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE81007 | GSE81007_cds.diff.gz | conservative | NA | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE72761 | GSE72761_DESeq_LS007-LS008-LS010_LS015-LS016-LS018_DEG_list.txt.gz | conservative | NA | other | NA | Mus musculus | 10090 | FALSE | ||
| GSE53040 | GSE53040_wtDMSOvswtTX34.txt.gz | bimodal | NA | NA | NA | NA | Neurospora crassa | 5141 | FALSE | |
| GSE69113 | GSE69113_BIPVUIP_differential_expression.txt.gz | other | NA | NA | NA | NA | Sus scrofa | 9823 | FALSE | |
| GSE49843 | GSE49843_gene_exp.diff_22345-22353.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE43194 | GSE43194_E11_ICR_abundance_rep1.txt.gz-set-0 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE43194 | GSE43194_E11_ICR_abundance_rep1.txt.gz-set-0 | bimodal | NA | NA | NA | NA | Gallus gallus | 9031 | FALSE | |
| GSE43194 | GSE43194_E11_ICR_abundance_rep1.txt.gz-set-1 | spiky | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE43194 | GSE43194_E11_ICR_abundance_rep1.txt.gz-set-1 | spiky | NA | NA | NA | NA | Gallus gallus | 9031 | FALSE | |
| GSE43194 | GSE43194_E11_ICR_abundance_rep1.txt.gz-set-2 | spiky | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE43194 | GSE43194_E11_ICR_abundance_rep1.txt.gz-set-2 | spiky | NA | NA | NA | NA | Gallus gallus | 9031 | FALSE | |
| GSE43614 | GSE43614_diff_out.txt.gz | other | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE98739 | GSE98739_Q111SST_vs_Q111DOP_DEGs_with_fpkm.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE80503 | GSE80503_RNASeqProcessedDESeqData.xlsx | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE72764 | GSE72764_DEseq_LS39-LS40-LS42_LS44-LS45-LS48_DEG_list.csv.gz | conservative | NA | other | NA | Mus musculus | 10090 | FALSE | ||
| GSE77499 | GSE77499_Dd2CQ_Dd2_3D7_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Plasmodium falciparum | 5833 | FALSE | |
| GSE53040 | GSE53040_wtDMSOvswtTX87.txt.gz | conservative | NA | NA | NA | NA | Neurospora crassa | 5141 | FALSE | |
| GSE61202 | GSE61202_NICvsMOdifferential_expression.txt.gz | conservative | NA | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE58464 | GSE58464_RNA-seq_tophat_microrazers_results.txt.gz-set-0 | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE58464 | GSE58464_RNA-seq_tophat_microrazers_results.txt.gz-set-1 | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE43194 | GSE43194_E11_ICR_abundance_rep2.txt.gz-set-0 | spiky | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE43194 | GSE43194_E11_ICR_abundance_rep2.txt.gz-set-0 | spiky | NA | NA | NA | NA | Gallus gallus | 9031 | FALSE | |
| GSE43194 | GSE43194_E11_ICR_abundance_rep2.txt.gz-set-1 | spiky | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE43194 | GSE43194_E11_ICR_abundance_rep2.txt.gz-set-1 | spiky | NA | NA | NA | NA | Gallus gallus | 9031 | FALSE | |
| GSE43194 | GSE43194_E11_ICR_abundance_rep2.txt.gz-set-2 | spiky | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE43194 | GSE43194_E11_ICR_abundance_rep2.txt.gz-set-2 | spiky | NA | NA | NA | NA | Gallus gallus | 9031 | FALSE | |
| GSE33782 | GSE33782_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE98739 | GSE98739_Q7SST_vs_Q111DOP_DEGs_with_fpkm.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE86211 | GSE86211_CmrA_transcriptome_Expression_of_all_genes.xlsx-sheet-PA14vsPJ01dT | other | NA | NA | NA | NA | Pseudomonas aeruginosa | 287 | FALSE | |
| GSE81007 | GSE81007_cds_exp.diff.gz | conservative | NA | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE87635 | GSE87635_CNOT3KO-WT.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE77499 | GSE77499_Dd2CQ_Dd2_3D7_isoform_exp.diff.gz | conservative | NA | NA | NA | NA | Plasmodium falciparum | 5833 | FALSE | |
| GSE66158 | GSE66158_all_genes_FPKM.txt.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE56284 | GSE56284_gene_exp.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE53976 | GSE53976_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Gallus gallus | 9031 | FALSE | |
| GSE43194 | GSE43194_HH18chick_abundance.txt.gz-set-0 | spiky | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE43194 | GSE43194_HH18chick_abundance.txt.gz-set-0 | spiky | NA | NA | NA | NA | Gallus gallus | 9031 | FALSE | |
| GSE43194 | GSE43194_HH18chick_abundance.txt.gz-set-1 | spiky | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE43194 | GSE43194_HH18chick_abundance.txt.gz-set-1 | spiky | NA | NA | NA | NA | Gallus gallus | 9031 | FALSE | |
| GSE43194 | GSE43194_HH18chick_abundance.txt.gz-set-2 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE43194 | GSE43194_HH18chick_abundance.txt.gz-set-2 | bimodal | NA | NA | NA | NA | Gallus gallus | 9031 | FALSE | |
| GSE33782 | GSE33782_isoform_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE98739 | GSE98739_Q7SST_vs_Q111SST_DEGs_with_fpkm.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE77769 | GSE77769_RNA_diff_final.txt.gz | spiky | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE81007 | GSE81007_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE36005 | GSE36005_emo_gene.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Gene_Rb_24v36.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE82210 | GSE82210_cuffdiff_lncOL1KO_vs_Ctrl.gene.fpkm.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE83137 | GSE83137_H2_vs_Lanact_pval.csv.gz | other | NA | other | NA | Streptomyces albus | 1888 | FALSE | ||
| GSE58586 | GSE58586_RNAseq-PDX-paired-tr-vs-untr_allintensity-filtered.txt.gz | other | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE49147 | GSE49147_ESC_KO_vs_WT.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE36005 | GSE36005_res_gene.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE32038 | GSE32038_cds_exp.diff.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Gene_Rb_24v48.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE91075 | GSE91075_gene_exp_WT1_KO1.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE81007 | GSE81007_isoform_exp.diff.gz | conservative | NA | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE49147 | GSE49147_iPS_PF1_vs_PF2.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE36005 | GSE36005_sus_gene.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE32038 | GSE32038_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Gene_Rb_36v48.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE91075 | GSE91075_gene_exp_WT2_KO2.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE77185 | GSE77185_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE74148 | GSE74148_RNA-seq0415.xlsx-set-0 | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE74148 | GSE74148_RNA-seq0415.xlsx-set-1 | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE74148 | GSE74148_RNA-seq0415.xlsx-set-2 | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE74148 | GSE74148_RNA-seq0415.xlsx-set-3 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE74148 | GSE74148_RNA-seq0415.xlsx-set-4 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE74148 | GSE74148_RNA-seq0415.xlsx-set-5 | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE58609 | GSE58609_MEF_WT_DKO.deseq.txt.gz-set-0 | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE58609 | GSE58609_MEF_WT_DKO.deseq.txt.gz-set-1 | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE71948 | GSE71948_RNASeqProcessedDESeqData.txt.gz | conservative | NA | other | NA | Mus musculus | 10090 | FALSE | ||
| GSE49147 | GSE49147_iPS_TTF1_vs_TTF2.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Gene_RbvRv_24.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE81007 | GSE81007_promoters.diff.gz | conservative | NA | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE65321 | GSE65321_RNASeqProcessedDESeqData.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE63750 | GSE63750_chemhigh-batch-result-using-R-DeSeq.csv.gz | bimodal | NA | other | NA | Staphylococcus aureus | 1280 | FALSE | ||
| GSE63750 | GSE63750_chemhigh-batch-result-using-R-DeSeq.csv.gz | bimodal | NA | other | NA | Staphylococcus aureus | 1280 | FALSE | ||
| GSE58405 | GSE58405_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE32038 | GSE32038_isoform_exp.diff.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE73972 | GSE73972_atxvsWT_gene_exp_diff.txt.gz | bimodal | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Gene_RbvRv_36.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE93620 | GSE93620_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE81007 | GSE81007_splicing.diff.gz | conservative | NA | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE78878 | GSE78878_30Cvs30P_score.txt.gz | bimodal | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE64854 | GSE64854_cds.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE65321 | GSE65321_RNASeqProcessedDESeqData_GSM1631482-GSM1631483.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE63555 | GSE63555_Ago2_immunoprecipitation_cuffdiff_fpkm.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE63750 | GSE63750_chemlow-batch-result-using-R-DeSeq.csv.gz | other | NA | other | NA | Staphylococcus aureus | 1280 | FALSE | ||
| GSE63750 | GSE63750_chemlow-batch-result-using-R-DeSeq.csv.gz | other | NA | other | NA | Staphylococcus aureus | 1280 | FALSE | ||
| GSE58405 | GSE58405_isoform_exp.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE53022 | GSE53022_mt_vs_wt.DESeq.txt.gz | conservative | NA | other | NA | Danio rerio | 7955 | FALSE | ||
| GSE90974 | GSE90974_Cuffdiff_Gene_RbvRv_48.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE81007 | GSE81007_tss_group_exp.diff.gz | conservative | NA | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE78878 | GSE78878_30CvsN2C_score.txt.gz | bimodal | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE80433 | GSE80433_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE79286 | GSE79286_CYC2vsWT_Conj-2.5hr_RNA-Seq.xlsx-sheet-gene_exp | bimodal | NA | NA | NA | NA | Tetrahymena thermophila | 5911 | FALSE | |
| GSE64854 | GSE64854_cds_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE63555 | GSE63555_Gene_expression_cuffdiff_fpkm.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE50557 | GSE50557_rnaseq-lbl1-Cuffdiff_gene_expression.txt.gz | conservative | NA | NA | NA | NA | Zea mays | 4577 | FALSE | |
| GSE50557 | GSE50557_rnaseq-lbl1-Cuffdiff_gene_expression.txt.gz | conservative | NA | NA | NA | NA | Zea mays | 4577 | FALSE | |
| GSE92989 | GSE92989_Drought_2_days.txt.gz | conservative | NA | NA | NA | NA | Oryza sativa | 4530 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Gene_RbvRv_Global.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE74929 | GSE74929_ANOVA_gene_rpkm.txt.gz-set-0 | other | NA | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE74929 | GSE74929_ANOVA_gene_rpkm.txt.gz-set-1 | other | NA | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE79507 | GSE79507_minipig.txt.gz | bimodal | NA | NA | NA | NA | Sus scrofa | 9823 | FALSE | |
| GSE81100 | GSE81100_old_ARSER_output.txt.gz | bimodal | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE61336 | GSE61336_results_167_vs_WTL.txt.gz | bimodal | NA | anti-conservative | 0.42 | Burkholderia cenocepacia | 95486 | FALSE | ||
| GSE78878 | GSE78878_30PvsN2P_score.txt.gz | bimodal | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE85576 | GSE85576_Supplementary_Table_1.xlsx-sheet-MagohMos2_vs_Control | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE84606 | GSE84606_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE79286 | GSE79286_CYC2vsWT_Conj-2hr_RNA-Seq.xlsx-sheet-C2vWT-2hr genes | bimodal | NA | NA | NA | NA | Tetrahymena thermophila | 5911 | FALSE | |
| GSE64854 | GSE64854_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE71284 | GSE71284_control_WT2_WT3_C1_C2_vs_truncation_3kb1_3kb2_100kb1_100kb2_CUFFDIFF_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE59290 | GSE59290_ANTI_isoform_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE54246 | GSE54246_Control_vs._4_NQO_Tongue_gene_exp.xlsx.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE52367 | GSE52367_Cuflinks_2338_2339.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE51847 | GSE51847_Expression_table_LE-2_x_HR-3.txt.gz | conservative | NA | NA | NA | NA | Schistosoma mansoni | 6183 | FALSE | |
| GSE92989 | GSE92989_Drought_3_days.txt.gz | conservative | NA | NA | NA | NA | Oryza sativa | 4530 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Gene_Rv_24v36.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE93870 | GSE93870_processed_file.xlsx-sheet-293FT_ZIKV.Vs.293FT_Control.DES | spiky | NA | anti-conservative | 0.88 | Homo sapiens | 9606 | FALSE | ||
| GSE93870 | GSE93870_processed_file.xlsx-sheet-BJ_ZIKV.Vs.BJ_Control.DESeq_Ana | spiky | NA | anti-conservative | 0.96 | Homo sapiens | 9606 | FALSE | ||
| GSE93870 | GSE93870_processed_file.xlsx-sheet-CHME_ZIKV.Vs.CHME_Control.DESeq | spiky | NA | anti-conservative | 0.81 | Homo sapiens | 9606 | FALSE | ||
| GSE93870 | GSE93870_processed_file.xlsx-sheet-THP1_ZIKV.Vs.THP1_Control.DESeq | spiky | NA | anti-conservative | 0.48 | Homo sapiens | 9606 | FALSE | ||
| GSE93870 | GSE93870_processed_file.xlsx-sheet-ZIKV.Vs.Control.DESeq_Analysis_ | spiky | NA | spiky | NA | Homo sapiens | 9606 | FALSE | ||
| GSE80597 | GSE80597_Processed_data_cuffdiff_output.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE80597 | GSE80597_Processed_data_cuffdiff_output.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE61336 | GSE61336_results_167_vs_WTZ.txt.gz | bimodal | NA | anti-conservative | 0.41 | Burkholderia cenocepacia | 95486 | FALSE | ||
| GSE83406 | GSE83406_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE78878 | GSE78878_N2CvsN2P_score.txt.gz | spiky | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE80301 | GSE80301_col_rep1_mom1_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE79286 | GSE79286_CYC2vsWT_Conj-3.5hr_RNA-Seq.xlsx-sheet-gene_exp | bimodal | NA | NA | NA | NA | Tetrahymena thermophila | 5911 | FALSE | |
| GSE64854 | GSE64854_isoform_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE61033 | GSE61033_DE_exonWT_vs_exonKOnoRN.txt.gz | bimodal | NA | anti-conservative | 0.71 | Mus musculus | 10090 | FALSE | ||
| GSE64455 | GSE64455_cuffdiff_out.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE66232 | GSE66232_B-ALL_Cuffdiff_Trim33.1271_rep1.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE59290 | GSE59290_MIR_isoform_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE57680 | GSE57680_RPKM_luminal_epithelium.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE32038 | GSE32038_tss_group_exp.diff.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Gene_Rv_24v48.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE93206 | GSE93206_Processed_data_files.xlsx-set-0 | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE93206 | GSE93206_Processed_data_files.xlsx-set-1 | spiky | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE77037 | GSE77037_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE61336 | GSE61336_results_WTL_vs_WTZ.txt.gz | conservative | NA | anti-conservative | 0.99 | Burkholderia cenocepacia | 95486 | FALSE | ||
| GSE76533 | GSE76533_leaf.gene_exp.diff.gz | conservative | NA | NA | NA | NA | Zea mays | 4577 | FALSE | |
| GSE83555 | GSE83555_WT-KO-mm9-gene_exp.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE80301 | GSE80301_col_rep1_nrpe1_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE79286 | GSE79286_CYC2vsWT_Conj-3hr_RNA-Seq.xlsx | bimodal | NA | NA | NA | NA | Tetrahymena thermophila | 5911 | FALSE | |
| GSE64854 | GSE64854_promoters.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE61033 | GSE61033_DE_intronWT_vs_intronKOnoRN.txt.gz | bimodal | NA | anti-conservative | 0.86 | Mus musculus | 10090 | FALSE | ||
| GSE57254 | GSE57254_Control_CELF1KD_abundances.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE66232 | GSE66232_B-ALL_Cuffdiff_Trim33.1271_rep2.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE52201 | GSE52201_RNAseq_processed_data_L_D_siLSD1.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE57680 | GSE57680_RPKM_stroma.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE58360 | GSE58360_Cebpa.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE50424 | GSE50424_Adipose.tsv.gz | conservative | NA | NA | NA | NA | Rattus norvegicus | 10116 | FALSE | |
| GSE52038 | GSE52038_Supplementary-table-1-date11021.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Gene_Rv_36v48.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE76533 | GSE76533_seedling.gene_exp.diff.gz | conservative | NA | NA | NA | NA | Zea mays | 4577 | FALSE | |
| GSE80301 | GSE80301_col_rep1_pial1pial2_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE64854 | GSE64854_splicing.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE70544 | GSE70544_Normoxia_vs_Hypoxia_Gencode_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE58359 | GSE58359_HOXA9.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE50424 | GSE50424_Liver.tsv.gz | conservative | NA | NA | NA | NA | Rattus norvegicus | 10116 | FALSE | |
| GSE42381 | GSE42381_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Rhodococcus opacus | 37919 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Gene_Sb_24v36.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE80301 | GSE80301_col_rep2_mom1_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE64854 | GSE64854_tss_group_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE70544 | GSE70544_Normoxia_vs_Hypoxia_Rinn_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE58379 | GSE58379_RBM47_alternative_splicing.txt.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE54982 | GSE54982_Differential_Gene_Expression_Summary.xlsx.gz-sheet-C1_WtE8.0_Vs_Wt10.0 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE54982 | GSE54982_Differential_Gene_Expression_Summary.xlsx.gz-sheet-C2_Wt_VS_ Tc E8.0 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE54982 | GSE54982_Differential_Gene_Expression_Summary.xlsx.gz-sheet-C3_Wt_VS_Tc_E10.0 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE54982 | GSE54982_Differential_Gene_Expression_Summary.xlsx.gz-sheet-C4_TcE8.0_VS_TcE10.0 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE37111 | GSE37111_clip.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE37111 | GSE37111_clip.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Gene_Sb_24v48.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE90615 | GSE90615_DifferentialExpression.xlsx-sheet-Sfrp2_12dP-MI_v Vehicle_12dP-MI | other | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE90615 | GSE90615_DifferentialExpression.xlsx-sheet-1dP-MI_vs_Vehicle_12dP-MI | uniform | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE90615 | GSE90615_DifferentialExpression.xlsx-sheet-1dP-MI_vs_Sfrp2_12dP-MI | uniform | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE80301 | GSE80301_col_rep2_mom1pial2_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE71943 | GSE71943_KO_vs_WT_diffGenes.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE70544 | GSE70544_Vehicle_vs_Cytokine_Gencode_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE66716 | GSE66716_Lim_et_al_14-3-3zKOWAT_Processed_data_Cuffdiff.xlsx | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE67674 | GSE67674_RNA-seq_analysis_AADMSOvsAAGSK-J4.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE54984 | GSE54984_Differential_Gene_Expression_Summary.xlsx.gz-sheet-ESCs_VS_EBDay4 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE54984 | GSE54984_Differential_Gene_Expression_Summary.xlsx.gz-sheet-ESCs_VS_EBDay4 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE54984 | GSE54984_Differential_Gene_Expression_Summary.xlsx.gz-sheet-EBDay4_ControlVSBrachyuryKD | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE54984 | GSE54984_Differential_Gene_Expression_Summary.xlsx.gz-sheet-EBDay4_ControlVSBrachyuryKD | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Gene_Sb_36v48.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE80301 | GSE80301_col_rep2_pial2_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE71281 | GSE71281_G53_veh_vs_SAA_Th17_CuffDiff_Gene_Differential.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE70544 | GSE70544_Vehicle_vs_Cytokine_Rinn_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE67554 | GSE67554_TAG5_Cuffdiff_gene_differential_expression_testing.txt.gz | bimodal | NA | NA | NA | NA | Eucalyptus grandis | 71139 | FALSE | |
| GSE98541 | GSE98541_RPE1_diff_expression_WT_SAFA.xlsx | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Gene_SbvSv_24.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE76232 | GSE76232_isoforms.diff_exp_ann_result.xls.gz | conservative | NA | NA | NA | NA | Ovis aries | 9940 | FALSE | |
| GSE67554 | GSE67554_ZG14_Cuffdiff_gene_differential_expression_testing.txt.gz | bimodal | NA | NA | NA | NA | Eucalyptus grandis | 71139 | FALSE | |
| GSE61851 | GSE61851_genelist-sortedbypadj.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE44665 | GSE44665_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Gene_SbvSv_36.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE81100 | GSE81100_youngARSER_output.txt.gz | bimodal | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE76151 | GSE76151_A1_isoform_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE72917 | GSE72917_DP1_WTvKO.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE70860 | GSE70860_DEaxons.csv.gz | spiky | NA | anti-conservative | 0.21 | Rattus norvegicus | 10116 | FALSE | ||
| GSE68102 | GSE68102_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE63570 | GSE63570_Rec_siRNA_RNA-seq.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE65542 | GSE65542_pnky_kd.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE40948 | GSE40948_MEF_vs_ESC_2replicates_expression.tsv.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE40948 | GSE40948_MEF_vs_ESC_2replicates_expression.tsv.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Gene_SbvSv_48.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE81123 | GSE81123_Poplar_RNAseq_data.ods.txt.gz | conservative | NA | NA | NA | NA | Populus tremula x Populus alba | 80863 | FALSE | |
| GSE71988 | GSE71988_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Bombyx mori | 7091 | FALSE | |
| GSE76151 | GSE76151_A2B1A1_isoform_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE71609 | GSE71609_2015_MZT.txt.gz-set-0 | bimodal | NA | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE71609 | GSE71609_2015_MZT.txt.gz-set-1 | conservative | NA | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE71609 | GSE71609_2015_MZT.txt.gz-set-2 | conservative | NA | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE71609 | GSE71609_2015_MZT.txt.gz-set-3 | bimodal | NA | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE71609 | GSE71609_2015_MZT.txt.gz-set-4 | bimodal | NA | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE69311 | GSE69311_deseq_diff_genes.csv.gz | bimodal | NA | anti-conservative | 0.79 | Mus musculus | 10090 | FALSE | ||
| GSE72917 | GSE72917_DP2_WTvKO.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE70860 | GSE70860_DEsoma.csv.gz | other | NA | other | NA | Rattus norvegicus | 10116 | FALSE | ||
| GSE65542 | GSE65542_ptbp1_kd.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE58910 | GSE58910_SenescentAstrocytesDEanalysis_v2.csv.gz | bimodal | NA | anti-conservative | 0.69 | Homo sapiens | 9606 | FALSE | ||
| GSE44668 | GSE44668_gene_exp_diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Gene_SbvSv_Global.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE76151 | GSE76151_A2B1_isoform_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE65142 | GSE65142_HYBP.txt.gz | bimodal | NA | NA | NA | NA | Raphanus sativus | 3726 | FALSE | |
| GSE76190 | GSE76190_OtA8535_vs_OtA8538_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE63838 | GSE63838_cds_exp_diff_2D.txt.gz | conservative | NA | NA | NA | NA | Solanum pimpinellifolium | 4084 | FALSE | |
| GSE72917 | GSE72917_KO_DP1vDP2.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE52153 | GSE52153_wtDMSOvsczt-1DMSO.txt.gz | bimodal | NA | NA | NA | NA | Neurospora crassa | 5141 | FALSE | |
| GSE40228 | GSE40228_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Gene_Sv_24v36.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE93021 | GSE93021_DSP-TP_LL-YY_FPKM.xlsx-sheet-DSP-TP_VS_LL-YY | conservative | NA | NA | NA | NA | Sus scrofa | 9823 | FALSE | |
| GSE93021 | GSE93021_DSP-TP_LL-YY_FPKM.xlsx-sheet-DSP-TP | conservative | NA | NA | NA | NA | Sus scrofa | 9823 | FALSE | |
| GSE93021 | GSE93021_DSP-TP_LL-YY_FPKM.xlsx-sheet-LL-YY | conservative | NA | NA | NA | NA | Sus scrofa | 9823 | FALSE | |
| GSE79680 | GSE79680_Heat_shock_table.csv.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE76190 | GSE76190_OtA8536_vs_OtA8539_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE72917 | GSE72917_WT_DP1vDP2.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE69175 | GSE69175_gene_exp.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE60822 | GSE60822_cuffdiff.control.ablation.tab.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE53789 | GSE53789_GFP_FACS_x_GFP_LCM-not_significant.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE51144 | GSE51144_all_exons.txt.gz | other | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE98387 | GSE98387_gene_exp.txt.gz | other | NA | other | NA | Mus musculus | 10090 | FALSE | ||
| GSE90974 | GSE90974_Cuffdiff_Gene_Sv_24v48.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE52911 | GSE52911_gene_exp.txt.gz | conservative | NA | NA | NA | NA | Citrus maxima | 37334 | FALSE | |
| GSE76683 | GSE76683_shHOXA7gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE79779 | GSE79779_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE65142 | GSE65142_YH.txt.gz | bimodal | NA | NA | NA | NA | Raphanus sativus | 3726 | FALSE | |
| GSE76190 | GSE76190_OtA8537_vs_OtA8540_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE60822 | GSE60822_cuffdiff.control.induction.tab.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE53789 | GSE53789_GFP_FACS_x_WT_FACS-not_significant.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE41487 | GSE41487_ResultsContr123vsRas123Multiple.xls.gz-sheet-RawData Contr123 vs Ras123 | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Gene_Sv_36v48.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE80237 | GSE80237_Supplementary_Data_1.txt.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE76682 | GSE76682_EB_AM580gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE75878 | GSE75878_cds.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE65987 | GSE65987_FPKM_for_MEFs.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE76190 | GSE76190_OtA8538_vs_OtA8541_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE60822 | GSE60822_cuffdiff.induction.ablation.tab.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE53789 | GSE53789_GFP_LCM_gt_GFP_FACS_gene_exp_with_zeros.diff.txt.gz | other | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE50203 | GSE50203_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE41487 | GSE41487_ResultsContr123vsRas12Multiple.xls.gz-sheet-RawData Contr123 vs Ras12 | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Gene_SvvRv_24.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE86323 | GSE86323_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Bos taurus | 9913 | FALSE | |
| GSE85308 | GSE85308_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE75878 | GSE75878_cds_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE76190 | GSE76190_OtA8539_vs_OtA8542_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE71164 | GSE71164_SCR-static_vs_SCR-FSS.tabular.txt.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE53789 | GSE53789_GFP_LCM_gt_WT_FACS_gene_exp_with_zeros.diff.txt.gz | other | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE50203 | GSE50203_isoform_exp.diff.gz | conservative | NA | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE56575 | GSE56575_cds_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE41090 | GSE41090_WT_vs_KO_full_genes.tab.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE39812 | GSE39812_FT_result_transcript_summary.tsv.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE94967 | GSE94967_cds_exp.diff_A_B_CDS.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Gene_SvvRv_36.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE69205 | GSE69205_gene_exp.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | TRUE | |
| GSE72820 | GSE72820_MDA1N-1P_RPKM.xlsx.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE85308 | GSE85308_processed_data.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE75878 | GSE75878_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE76190 | GSE76190_OtA8540_vs_OtA8543_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE71164 | GSE71164_SCR-static_vs_SH-EZH2-static.tabular.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE53789 | GSE53789_GFP_LCM_x_GFP_FACS-not_significant.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE56097 | GSE56097_Cufflinks_CuffDiff_gene_exp.txt.gz | conservative | NA | NA | NA | NA | Cavia porcellus | 10141 | FALSE | |
| GSE49097 | GSE49097_BetweenGenotypes_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Glycine max | 3847 | FALSE | |
| GSE84158 | GSE84158_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE94967 | GSE94967_gene_exp.diff_A_B_GENE.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Gene_SvvRv_48.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE62040 | GSE62040_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE72820 | GSE72820_MDA27N-27P_RPKM.xlsx.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE75878 | GSE75878_isoform_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE70068 | GSE70068_GM_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE72560 | GSE72560_Enteric_Glia.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE53789 | GSE53789_GFP_LCM_x_WT_FACS-not_significant.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE49097 | GSE49097_CompareAll_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Glycine max | 3847 | FALSE | |
| GSE39812 | GSE39812_TB_result_transcript_summary.tsv.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE94967 | GSE94967_isoform_exp.diff_A_B_ISOFORM.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Gene_SvvRv_Global.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE77395 | GSE77395_A_OE_air_vs_Col_air.diff.gz | conservative | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE72820 | GSE72820_MDA2N-2P_RPKM.xlsx.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE70815 | GSE70815_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE76992 | GSE76992_GFP_vs_p16.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE74868 | GSE74868_ETS2_T72D_OE_Epi_RNAseq.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE60701 | GSE60701_AL_R_vs_AL_L.diff_expressed_transcripts.tsv.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE49097 | GSE49097_Within_A_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Glycine max | 3847 | FALSE | |
| GSE94967 | GSE94967_tss_group_exp.diff_A_B_TSS.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Transcript_Rb_24v36.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE77395 | GSE77395_col_air_vs_ethylene.diff.gz | bimodal | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE72820 | GSE72820_MDA31N-31P_RPKM.xlsx.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE75833 | GSE75833_DESeq-processed_FB.control_vs_FB.25mkM.4HT.txt.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE77256 | GSE77256_Cuffdiff_Anagen_HFSCs.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE70068 | GSE70068_TNF_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE60701 | GSE60701_ChL_R_vs_AL_R.diff_expressed_transcripts.tsv.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE49097 | GSE49097_Within_B_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Glycine max | 3847 | FALSE | |
| GSE39605 | GSE39605_All_KOvsWT_filtered_final.xlsx.gz-sheet-All_KOvsWT_filtered | conservative | NA | other | NA | Mus musculus | 10090 | FALSE | ||
| GSE39652 | GSE39652_20111201c2Day3_gene_exp.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE39652 | GSE39652_20111201c2Day3_gene_exp.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Transcript_Rb_24v48.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE87808 | GSE87808_diffExp_Slc7a5_Cerebellum_allGenes.txt.gz | spiky | NA | anti-conservative | 0.83 | Mus musculus | 10090 | FALSE | ||
| GSE79412 | GSE79412_amiFPSa_gene_exp_diff.xlsx-sheet-Hoja1 | conservative | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE73192 | GSE73192_cds_chromosome_exp.diff.gz | bimodal | NA | NA | NA | NA | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | 99287 | FALSE | |
| GSE72820 | GSE72820_MDA33N-33P_RPKM.xlsx.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE84786 | GSE84786_isoform_exp.xlsx-sheet-isoform_exp | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE84786 | GSE84786_isoform_exp.xlsx-sheet-Fold change | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE75878 | GSE75878_tss_group_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE77256 | GSE77256_Cuffdiff_Telogen_HFSCs.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE70108 | GSE70108_G263_CuffDiff_WTvsDDX5Tko.tabular.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE62909 | GSE62909_Differential_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE72178 | GSE72178_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE53789 | GSE53789_WT_FACS_x_GFP_FACS-not_significant.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE61031 | GSE61031_DE_polyaWT_vs_polyaKO.txt.gz | bimodal | NA | anti-conservative | 0.84 | Mus musculus | 10090 | FALSE | ||
| GSE60701 | GSE60701_ChL_R_vs_ChL_L.diff_expressed_transcripts.tsv.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE49097 | GSE49097_Within_WT_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Glycine max | 3847 | FALSE | |
| GSE57517 | GSE57517_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE56058 | GSE56058_differentialExpressionGenes_RD19.txt.gz | other | NA | NA | NA | NA | Deinococcus deserti | 310783 | FALSE | |
| GSE39652 | GSE39652_20111201c2LZ_gene_exp.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE39652 | GSE39652_20111201c2LZ_gene_exp.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE83217 | GSE83217_Processed_Matrix_FPKM.xlsx-sheet-siScramble_vs_siHdac4 | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE83217 | GSE83217_Processed_Matrix_FPKM.xlsx-sheet-siScramble_vs_siBdnf | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Transcript_Rb_36v48.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE84308 | GSE84308_RNA.txt.gz | spiky | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE76287 | GSE76287_rosettes_col0vdko_tair.txt.gz | conservative | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE72820 | GSE72820_MDA34N-34P_RPKM.xlsx.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE86077 | GSE86077_N2_EVvs28_D4.diff.gz | conservative | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE77256 | GSE77256_Cuffdiff_all_HFSCs.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE72830 | GSE72830_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE70108 | GSE70108_G340_CuffDiff_WTvsRORgko.tabular.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE70068 | GSE70068_UT_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE53789 | GSE53789_WT_FACS_x_GFP_LCM-not_significant.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE39652 | GSE39652_20111201c2Pach_gene_exp.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE39652 | GSE39652_20111201c2Pach_gene_exp.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Transcript_RbvRv_24.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE76287 | GSE76287_seedling_col0vdko_tair.txt.gz | bimodal | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE72820 | GSE72820_MDA3N-3P_RPKM.xlsx.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE86077 | GSE86077_glp-1_EVvs28_D4.diff.gz | conservative | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE84798 | GSE84798_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Brassica napus | 3708 | FALSE | |
| GSE80972 | GSE80972_frm_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE70785 | GSE70785_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE72830 | GSE72830_tss_group_exp.diff.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE72787 | GSE72787_deseq2_closed_vs_open.tsv.gz | spiky | NA | NA | NA | NA | Rattus norvegicus | 10116 | FALSE | |
| GSE69855 | GSE69855_gene_exp_ResvResVag.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE53789 | GSE53789_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE52080 | GSE52080_processed_data.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE55596 | GSE55596_LOLOdiff_nonovel.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE39652 | GSE39652_20111201c2PreMeiotic_gene_exp.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE39652 | GSE39652_20111201c2PreMeiotic_gene_exp.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE97525 | GSE97525_Dm_AKHR_F2_RNA-seq.xlsx-sheet-PP vs WT | other | NA | other | NA | Drosophila melanogaster | 7227 | FALSE | ||
| GSE97525 | GSE97525_Dm_AKHR_F2_RNA-seq.xlsx-sheet-PM vs WT | other | NA | other | NA | Drosophila melanogaster | 7227 | FALSE | ||
| GSE97525 | GSE97525_Dm_AKHR_F2_RNA-seq.xlsx-sheet-PP vs PM | other | NA | other | NA | Drosophila melanogaster | 7227 | FALSE | ||
| GSE90974 | GSE90974_Cuffdiff_Transcript_RbvRv_36.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE83601 | GSE83601_All_genes_in_controls_and_PTSD.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE84529 | GSE84529_Paired_comparison_of_three_sections_Cuffdiff.xlsx-sheet-Comparison_0-5_mm_vs_15-20_mm | bimodal | NA | NA | NA | NA | Postia placenta | 104341 | FALSE | |
| GSE84529 | GSE84529_Paired_comparison_of_three_sections_Cuffdiff.xlsx-sheet-Comparison_0-5_mm_vs_30-35_mm | bimodal | NA | NA | NA | NA | Postia placenta | 104341 | FALSE | |
| GSE84529 | GSE84529_Paired_comparison_of_three_sections_Cuffdiff.xlsx-sheet-Comparison_30-35_mm_vs_15-20_mm | conservative | NA | NA | NA | NA | Postia placenta | 104341 | FALSE | |
| GSE72947 | GSE72947_Dm_sir2_RNA-seq.xlsx-sheet-Analyzed Genes | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE64747 | GSE64747_deseq_comp_DMSO_minus_TEX_vs_compound59_minus_TEX_with_annot_and_counts.txt.gz | conservative | NA | NA | NA | NA | Staphylococcus aureus | 1280 | FALSE | |
| GSE72321 | GSE72321_annotated_diffana_6-OHDA-6-OHDA_En.xlsx | conservative | NA | other | NA | Mus musculus | 10090 | FALSE | ||
| GSE69855 | GSE69855_gene_exp_ResvSham.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE55596 | GSE55596_alldiff_nonovel.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE85627 | GSE85627_mDUX-mESC.xlsx.gz-sheet-Transient | spiky | NA | other | NA | Mus musculus | 10090 | FALSE | ||
| GSE90974 | GSE90974_Cuffdiff_Transcript_RbvRv_48.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE81191 | GSE81191_Cuffdiff_Isoform.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE86521 | GSE86521_DESeq_out_KO_vs_WT.txt.gz | bimodal | NA | anti-conservative | 0.74 | Mus musculus | 10090 | FALSE | ||
| GSE72321 | GSE72321_annotated_diffana_gain-of-function_En1-ipsi-contra.xlsx | conservative | NA | spiky | NA | Mus musculus | 10090 | FALSE | ||
| GSE71153 | GSE71153_projectLindholmPerry_USDA0001AL_master_list.txt.gz | spiky | NA | NA | NA | NA | Bos taurus | 9913 | FALSE | |
| GSE69900 | GSE69900_control-CBD16H.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE51119 | GSE51119_IBH1KD_vs_Col_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Transcript_RbvRv_Global.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE81191 | GSE81191_Cuffdiff_transcript.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE76487 | GSE76487_shMBNL1_gene_exp_diff.txt.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE72321 | GSE72321_annotated_diffana_loss-of-function_En1LacZ-WT.xlsx | conservative | NA | spiky | NA | Mus musculus | 10090 | FALSE | ||
| GSE69900 | GSE69900_control-tamoxifen48H.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE62633 | GSE62633_Differential_expression_table.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE46046 | GSE46046_GenesTable.txt.gz | spiky | NA | anti-conservative | 0.93 | Gallus gallus | 9031 | FALSE | ||
| GSE51119 | GSE51119_IBH1ox_vs_Col_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE40218 | GSE40218_processed_DESeq.txt.gz | bimodal | NA | anti-conservative | 0.89 | Homo sapiens | 9606 | FALSE | ||
| GSE40218 | GSE40218_processed_DESeq.txt.gz | bimodal | NA | anti-conservative | 0.89 | Mus musculus | 10090 | FALSE | ||
| GSE90974 | GSE90974_Cuffdiff_Transcript_Rv_24v36.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE87532 | GSE87532_gene_exp.diff.name.txt.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE84370 | GSE84370_APC_0h_vs_1h_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE86248 | GSE86248_shControl-vs-shPaf1-gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE60691 | GSE60691_processed_data_aso_wild_type.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE72341 | GSE72341_DEseq_results.xlsx | bimodal | NA | spiky | NA | Mus musculus | 10090 | FALSE | ||
| GSE62760 | GSE62760_Acute_Cuffdiff_DGE.txt.gz | bimodal | NA | NA | NA | NA | Rattus norvegicus | 10116 | FALSE | |
| GSE59781 | GSE59781_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE61566 | GSE61566_cds.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE51119 | GSE51119_bHLH159KD_vs_Col_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE36866 | GSE36866_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE97258 | GSE97258_differential_expression.xls.gz-sheet-Sheet1 | bimodal | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE97258 | GSE97258_differential_expression.xls.gz-sheet-Sheet1 | bimodal | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Transcript_Rv_24v48.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE84370 | GSE84370_APC_0h_vs_2h_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE76396 | GSE76396_isoform_exp.diff.gz | conservative | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE86248 | GSE86248_shControl-vs-shPhf5a-gene_exp_1_.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE69556 | GSE69556_cds_exp.diff.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE60691 | GSE60691_processed_data_krkr_sumo_mut.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE62760 | GSE62760_Chronic_Cuffdiff_DGE.txt.gz | bimodal | NA | NA | NA | NA | Rattus norvegicus | 10116 | FALSE | |
| GSE51119 | GSE51119_bHLH159ox_vs_Col_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE49581 | GSE49581_lincBrn1b_All_timepoints_cuffdiff.tab.gz-set-0 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE49581 | GSE49581_lincBrn1b_All_timepoints_cuffdiff.tab.gz-set-0 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE49581 | GSE49581_lincBrn1b_All_timepoints_cuffdiff.tab.gz-set-1 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE49581 | GSE49581_lincBrn1b_All_timepoints_cuffdiff.tab.gz-set-1 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE49581 | GSE49581_lincBrn1b_All_timepoints_cuffdiff.tab.gz-set-2 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE49581 | GSE49581_lincBrn1b_All_timepoints_cuffdiff.tab.gz-set-2 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE49581 | GSE49581_lincBrn1b_All_timepoints_cuffdiff.tab.gz-set-3 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE49581 | GSE49581_lincBrn1b_All_timepoints_cuffdiff.tab.gz-set-3 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE49581 | GSE49581_lincBrn1b_All_timepoints_cuffdiff.tab.gz-set-4 | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE49581 | GSE49581_lincBrn1b_All_timepoints_cuffdiff.tab.gz-set-4 | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE49581 | GSE49581_lincBrn1b_All_timepoints_cuffdiff.tab.gz-set-5 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE49581 | GSE49581_lincBrn1b_All_timepoints_cuffdiff.tab.gz-set-5 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE49581 | GSE49581_lincBrn1b_All_timepoints_cuffdiff.tab.gz-set-6 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE49581 | GSE49581_lincBrn1b_All_timepoints_cuffdiff.tab.gz-set-6 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE49581 | GSE49581_lincBrn1b_All_timepoints_cuffdiff.tab.gz-set-7 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE49581 | GSE49581_lincBrn1b_All_timepoints_cuffdiff.tab.gz-set-7 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE49581 | GSE49581_lincBrn1b_All_timepoints_cuffdiff.tab.gz-set-8 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE49581 | GSE49581_lincBrn1b_All_timepoints_cuffdiff.tab.gz-set-8 | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE49587 | GSE49587_L2_L3P1_2_DEUtable.txt.gz | other | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE98650 | GSE98650_mb1_hdac3_cuffdiff_out.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Transcript_Rv_36v48.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE93866 | GSE93866_IDOE_GENE_EXPRESSION.xlsx | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE70699 | GSE70699_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE68460 | GSE68460_WSVSBS_gene_diff.xls.gz-sheet-Sheet1 | conservative | NA | NA | NA | NA | Gallus gallus | 9031 | FALSE | |
| GSE56122 | GSE56122_IFN-gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE63884 | GSE63884_gene_exp.diff_cenpk_imx372_aerobic.txt.gz | uniform | NA | NA | NA | NA | Saccharomyces cerevisiae | 4932 | FALSE | |
| GSE61566 | GSE61566_cds_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE46502 | GSE46502_diff_gene_exp_PR_all.xlsx.gz-sheet-gene_exp.diff | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE49587 | GSE49587_L312hr_L3P1_2_DEUtable.txt.gz | other | NA | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Transcript_Sb_24v36.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE95006 | GSE95006_RNA-seq_Summary.xls.gz-sheet-Trip_delta_vs_J-set-0 | other | NA | NA | NA | NA | Helicobacter pylori J99 | 85963 | FALSE | |
| GSE95006 | GSE95006_RNA-seq_Summary.xls.gz-sheet-Trip_delta_vs_J-set-1 | other | NA | NA | NA | NA | Helicobacter pylori J99 | 85963 | FALSE | |
| GSE72712 | GSE72712_ESCd_40-70_over_ESCd_lt40.cuffdiff.xlsx-sheet-EST-d_40-70_over_EST-d_lt40 | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE65337 | GSE65337_Nfix_KO_vs_WT_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE68460 | GSE68460_gene_exp.xls.gz-sheet-Sheet1 | conservative | NA | NA | NA | NA | Gallus gallus | 9031 | FALSE | |
| GSE65039 | GSE65039_gene_exp1.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE63226 | GSE63226_WRR+vsWRR-.xls.gz | conservative | NA | NA | NA | NA | Gallus gallus | 9031 | FALSE | |
| GSE61566 | GSE61566_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE50156 | GSE50156_WT_36oC_15min_AND_WT_24oC.txt.gz | conservative | NA | NA | NA | NA | Schizosaccharomyces pombe | 4896 | FALSE | |
| GSE47062 | GSE47062_KO_vs_WT.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE90974 | GSE90974_Cuffdiff_Transcript_Sb_24v48.txt.gz | conservative | NA | NA | NA | NA | Aedes aegypti | 7159 | FALSE | |
| GSE72712 | GSE72712_ESCd_40-70_over_ESCu.cuffdiff.xlsx-sheet-EST-d_40-70_over_EST-u.cuffdiff | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE77304 | GSE77304_gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE78506 | GSE78506_dmso_vs_ca_24Hour_geneExp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE66547 | GSE66547_20150828-oocyteMut_vs_oocyteWt-deResults.xlsx-sheet-Genes | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE56122 | GSE56122_LPS-gene_exp.diff.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE50156 | GSE50156_mas5D_AND_WT_24oC.txt.gz | conservative | NA | NA | NA | NA | Schizosaccharomyces pombe | 4896 | FALSE | |
| GSE37703 | GSE37703_hiseq_cuffdiff_cds_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_hiseq_cuffdiff_cds_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_hiseq_cuffdiff_cds.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_hiseq_cuffdiff_cds.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_hiseq_cuffdiff_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_hiseq_cuffdiff_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_hiseq_cuffdiff_isoform_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_hiseq_cuffdiff_isoform_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_hiseq_cuffdiff_promoters.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_hiseq_cuffdiff_promoters.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_hiseq_cuffdiff_splicing.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_hiseq_cuffdiff_splicing.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_hiseq_cuffdiff_tss_group_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_hiseq_cuffdiff_tss_group_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_miseq_cuffdiff_cds_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_miseq_cuffdiff_cds_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_miseq_cuffdiff_cds.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_miseq_cuffdiff_cds.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_miseq_cuffdiff_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_miseq_cuffdiff_gene_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_miseq_cuffdiff_isoform_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_miseq_cuffdiff_isoform_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_miseq_cuffdiff_promoters.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_miseq_cuffdiff_promoters.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_miseq_cuffdiff_splicing.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_miseq_cuffdiff_splicing.diff.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_miseq_cuffdiff_tss_group_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37703 | GSE37703_miseq_cuffdiff_tss_group_exp.diff.gz | bimodal | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE40187 | GSE40187_gene_exp_diff_Control_NXD30001_fromtophat120_cufflinks102_c0_081612.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE40187 | GSE40187_gene_exp_diff_Control_NXD30001_fromtophat120_cufflinks102_c0_081612.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE40187 | GSE40187_gene_exp_diff_MG1_MG2_fromtophat120_cufflinks102_c0_081612.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE40187 | GSE40187_gene_exp_diff_MG1_MG2_fromtophat120_cufflinks102_c0_081612.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE44233 | GSE44233_processed_data.txt.gz | spiky | NA | anti-conservative | 0.72 | Danio rerio | 7955 | FALSE | ||
| GSE44233 | GSE44233_processed_data.txt.gz | spiky | NA | anti-conservative | 0.72 | Danio rerio | 7955 | FALSE | ||
| GSE50198 | GSE50198_Tet2kd_vs_v6.5_DESeq_results.txt.gz-set-0 | bimodal | NA | anti-conservative | 0.66 | Mus musculus | 10090 | FALSE | ||
| GSE50198 | GSE50198_Tet2kd_vs_v6.5_DESeq_results.txt.gz-set-0 | bimodal | NA | anti-conservative | 0.66 | Mus musculus | 10090 | FALSE | ||
| GSE58052 | GSE58052_N.winogradskyi_co-culture_over_single-culture.txt.gz | spiky | NA | NA | NA | NA | Nitrosomonas europaea | 915 | FALSE | |
| GSE58052 | GSE58052_N.winogradskyi_co-culture_over_single-culture.txt.gz | spiky | NA | NA | NA | NA | Nitrobacter winogradskyi | 913 | FALSE | |
| GSE58052 | GSE58052_N.winogradskyi_co-culture_over_single-culture.txt.gz | spiky | NA | NA | NA | NA | Nitrobacter winogradskyi | 913 | TRUE | |
| GSE59705 | GSE59705_DEXseqresultstable.txt.gz | other | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE59705 | GSE59705_DEXseqresultstable.txt.gz | other | NA | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE63161 | GSE63161_diff-Gene-list.txt.gz | spiky | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE63161 | GSE63161_diff-Gene-list.txt.gz | spiky | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE66767 | GSE66767_CD34_cord_blood.EET.txt.gz | spiky | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE66767 | GSE66767_CD34_cord_blood.EET.txt.gz | spiky | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE66767 | GSE66767_U937.EET.txt.gz | spiky | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE66767 | GSE66767_U937.EET.txt.gz | spiky | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE67654 | GSE67654_RNA-seq.xlsx.gz-sheet-Sheet1-set-0 | other | NA | NA | NA | NA | Solanum pimpinellifolium | 4084 | FALSE | |
| GSE67654 | GSE67654_RNA-seq.xlsx.gz-sheet-Sheet1-set-0 | other | NA | NA | NA | NA | Solanum chilense | 4083 | FALSE | |
| GSE67654 | GSE67654_RNA-seq.xlsx.gz-sheet-Sheet1-set-1 | other | NA | NA | NA | NA | Solanum pimpinellifolium | 4084 | FALSE | |
| GSE67654 | GSE67654_RNA-seq.xlsx.gz-sheet-Sheet1-set-1 | other | NA | NA | NA | NA | Solanum chilense | 4083 | FALSE | |
| GSE68176 | GSE68176_Camfl1.gene_exp.diff.gz | spiky | NA | NA | NA | NA | Camponotus castaneus | 105051 | TRUE | |
| GSE68176 | GSE68176_Camfl1.gene_exp.diff.gz | spiky | NA | NA | NA | NA | Camponotus castaneus | 105051 | FALSE | |
| GSE68176 | GSE68176_Camfl1.gene_exp.diff.gz | spiky | NA | NA | NA | NA | Ophiocordyceps unilateralis | 268505 | FALSE | |
| GSE72860 | GSE72860_RNA-seq_log2fdc.txt.gz | spiky | NA | anti-conservative | 0.64 | Mus musculus | 10090 | FALSE | ||
| GSE72860 | GSE72860_RNA-seq_log2fdc.txt.gz | spiky | NA | anti-conservative | 0.64 | Mus musculus | 10090 | FALSE | ||
| GSE72860 | GSE72860_RRBS_CpG_methylation_call.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE72860 | GSE72860_RRBS_CpG_methylation_call.txt.gz | bimodal | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE78711 | GSE78711_gene.exp.all.txt.gz | spiky | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE78711 | GSE78711_gene.exp.all.txt.gz | spiky | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE84875 | GSE84875_human_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE84875 | GSE84875_human_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE84875 | GSE84875_mouse_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE84875 | GSE84875_mouse_gene_exp.diff.txt.gz | conservative | NA | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE86239 | GSE86239_ETS2shRNA_gene_exp.diff.gz | spiky | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE86239 | GSE86239_ETS2shRNA_gene_exp.diff.gz | spiky | NA | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE91001 | GSE91001_Galaxy255-AveragedPerCRNAseqData.tabular.txt.gz | spiky | NA | NA | NA | NA | Escherichia coli | 562 | FALSE | |
| GSE91001 | GSE91001_Galaxy255-AveragedPerCRNAseqData.tabular.txt.gz | spiky | NA | NA | NA | NA | Escherichia coli O127:H6 str. E2348/69 | 574521 | FALSE | |
| GSE91001 | GSE91001_PerC_RNAseq_averageddata.xls.gz-sheet-diffexp_rerun | spiky | NA | NA | NA | NA | Escherichia coli | 562 | FALSE | |
| GSE91001 | GSE91001_PerC_RNAseq_averageddata.xls.gz-sheet-diffexp_rerun | spiky | NA | NA | NA | NA | Escherichia coli O127:H6 str. E2348/69 | 574521 | FALSE | |
| GSE83736 | GSE83736_DESeq2.Vav.KO.C_vs_Vav.WT.C.txt.gz | anti-conservative | 0.52 | anti-conservative | 0.30 | Mus musculus | 10090 | FALSE | ||
| GSE63707 | GSE63707_DEXSeqResults_AretIR_03d_vs_IFMWT_03d.txt.gz | anti-conservative | 0.67 | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE51645 | GSE51645_DE_processed_data.txt.gz | anti-conservative | 0.76 | NA | NA | NA | Saccharomyces cerevisiae | 4932 | FALSE | |
| GSE51645 | GSE51645_DE_processed_data.txt.gz | anti-conservative | 0.76 | NA | NA | NA | Saccharomyces cerevisiae | 4932 | FALSE | |
| GSE97406 | GSE97406_CRP_K100Q_vs_CRP_Control.csv.gz-set-0 | anti-conservative | 0.01 | NA | NA | NA | Escherichia coli | 562 | FALSE | |
| GSE97406 | GSE97406_CRP_K100Q_vs_CRP_Control.csv.gz-set-1 | anti-conservative | 0.02 | NA | NA | NA | Escherichia coli | 562 | FALSE | |
| GSE83736 | GSE83736_DESeq2.Vav.WTvsKO.StimulatedInteractions.txt.gz | anti-conservative | 0.56 | anti-conservative | 0.32 | Mus musculus | 10090 | FALSE | ||
| GSE63707 | GSE63707_DEXSeqResults_AretIR_03d_vs_salm_ko.txt.gz | anti-conservative | 0.59 | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE67834 | GSE67834_DESeq2_genes_diffexp_by_fc_mTECs_vs_sp-DCs.csv.gz | anti-conservative | 0.29 | anti-conservative | 0.13 | Mus musculus | 10090 | FALSE | ||
| GSE70290 | GSE70290_PV_Transcripts.txt.gz | anti-conservative | 0.01 | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE63707 | GSE63707_DEXSeqResults_AretIR_30h_vs_IFMWT_30h.txt.gz | anti-conservative | 0.69 | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE67834 | GSE67834_DESeq2_genes_diffexp_by_fc_mTECs_vs_t-DCs.csv.gz | anti-conservative | 0.27 | anti-conservative | 0.11 | Mus musculus | 10090 | FALSE | ||
| GSE87365 | GSE87365_gene_exp_diff_fc_yes_reg_Fetal_stem_cells_and_FACS_sort_vs_Fetal_stem_cells.xls.gz | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE81237 | GSE81237_DE_RNAseqseq_analysis_DESeq_TTP-AAvsGFP.csv.gz | anti-conservative | 0.66 | anti-conservative | 0.59 | Mus musculus | 10090 | FALSE | ||
| GSE67360 | GSE67360_differentially_expressed_transcripts.txt.gz | anti-conservative | 0.00 | NA | NA | NA | Gallus gallus | 9031 | FALSE | |
| GSE63707 | GSE63707_DEXSeqResults_AretIR_72h_vs_IFMWT_72h.txt.gz | anti-conservative | 0.67 | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE97406 | GSE97406_CRP_K100R_vs_CRP_Control.csv.gz-set-0 | anti-conservative | 0.01 | NA | NA | NA | Escherichia coli | 562 | FALSE | |
| GSE97406 | GSE97406_CRP_K100R_vs_CRP_Control.csv.gz-set-1 | anti-conservative | 0.02 | NA | NA | NA | Escherichia coli | 562 | FALSE | |
| GSE67834 | GSE67834_DESeq2_genes_diffexp_by_fc_sp-DCs_vs_mTECs.csv.gz | anti-conservative | 0.29 | anti-conservative | 0.13 | Mus musculus | 10090 | FALSE | ||
| GSE81237 | GSE81237_DE_RNAseqseq_analysis_DESeq_TTP-AAvsTTP.csv.gz | anti-conservative | 0.56 | anti-conservative | 0.48 | Mus musculus | 10090 | FALSE | ||
| GSE77077 | GSE77077_HT_data_36hpf.xls.gz | anti-conservative | 0.43 | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE59335 | GSE59335_exons_sig_anno_total.txt.gz | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE59335 | GSE59335_exons_sig_anno_total.txt.gz | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE33736 | GSE33736_HAmCqG0_G8expression.txt.gz | anti-conservative | 0.60 | NA | NA | NA | Culex quinquefasciatus | 7176 | FALSE | |
| GSE67834 | GSE67834_DESeq2_genes_diffexp_by_fc_sp-DCs_vs_t-DCs.csv.gz | anti-conservative | 0.52 | anti-conservative | 0.22 | Mus musculus | 10090 | FALSE | ||
| GSE87706 | GSE87706_SM_vs_RODI.txt.gz | anti-conservative | 0.27 | anti-conservative | 0.13 | Staphylococcus aureus | 1280 | FALSE | ||
| GSE87365 | GSE87365_gene_exp_diff_fc_yes_reg_Fetal_stem_cells_vs_Fetal_myotubes.xls.gz | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE81237 | GSE81237_DE_RNAseqseq_analysis_DESeq_TTPvsGFP.csv.gz | anti-conservative | 0.75 | anti-conservative | 0.69 | Mus musculus | 10090 | FALSE | ||
| GSE97406 | GSE97406_CRP_WT_vs_CRP_Control.csv.gz-set-0 | anti-conservative | 0.01 | NA | NA | NA | Escherichia coli | 562 | FALSE | |
| GSE97406 | GSE97406_CRP_WT_vs_CRP_Control.csv.gz-set-1 | anti-conservative | 0.02 | NA | NA | NA | Escherichia coli | 562 | FALSE | |
| GSE67834 | GSE67834_DESeq2_genes_diffexp_by_fc_t-DCs_vs_mTECs.csv.gz | anti-conservative | 0.27 | anti-conservative | 0.11 | Mus musculus | 10090 | FALSE | ||
| GSE87495 | GSE87495_results_dds_gencode22.csv.gz | anti-conservative | 0.34 | anti-conservative | 0.15 | Homo sapiens | 9606 | FALSE | ||
| GSE57397 | GSE57397_degexp.KO-REC-REP1-RNA.vs.KO-HS-REP1-RNA.output_score.txt.gz | anti-conservative | 0.38 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE63707 | GSE63707_DEXSeqResults_salm_ko_vs_IFMWT_03d.txt.gz | anti-conservative | 0.65 | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE67834 | GSE67834_DESeq2_genes_diffexp_by_fc_t-DCs_vs_sp-DCs.csv.gz | anti-conservative | 0.52 | anti-conservative | 0.22 | Mus musculus | 10090 | FALSE | ||
| GSE57397 | GSE57397_degexp.KO-REC-REP2-RNA.vs.KO-HS-REP2-RNA.output_score.txt.gz | anti-conservative | 0.39 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE57397 | GSE57397_degexp.WT-REC-REP1-RNA.vs.WT-HS-REP1-RNA.output_score.txt.gz | anti-conservative | 0.34 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_24h_LNCAP_SFN.diff.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_24h_LNCAP_SFN.diff.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_24h_LNCAP_SFN.diff.txt.gz-set-2 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE57397 | GSE57397_degexp.WT-REC-REP2-RNA.vs.WT-HS-REP2-RNA.output_score.txt.gz | anti-conservative | 0.37 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_24h_LNCAPvsPC3.diff.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_24h_LNCAPvsPC3.diff.txt.gz-set-1 | anti-conservative | 0.01 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_24h_LNCAPvsPC3.diff.txt.gz-set-2 | anti-conservative | 0.01 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_24h_PC3_SFN.diff.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_24h_PC3_SFN.diff.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_24h_PC3_SFN.diff.txt.gz-set-2 | anti-conservative | 0.01 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE77044 | GSE77044_comparison2.xls.gz | anti-conservative | 0.69 | anti-conservative | 0.66 | Entamoeba histolytica HM-1:IMSS | 294381 | FALSE | ||
| GSE58053 | GSE58053_25mm-over-0mm.txt.gz | anti-conservative | 0.56 | NA | NA | NA | Nitrobacter winogradskyi | 913 | FALSE | |
| GSE48812 | GSE48812_24h_PREC_SFN.diff.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_24h_PREC_SFN.diff.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_24h_PREC_SFN.diff.txt.gz-set-2 | anti-conservative | 0.01 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE43650 | GSE43650_gene_exp_diff_sig.txt.gz | anti-conservative | 0.00 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE63141 | GSE63141_eTMglc_gene_exp.diff.gz | anti-conservative | 0.95 | NA | NA | NA | Thermotoga maritima MSB8 | 243274 | FALSE | |
| GSE58053 | GSE58053_25mm-over-1mm.txt.gz | anti-conservative | 0.68 | NA | NA | NA | Nitrobacter winogradskyi | 913 | FALSE | |
| GSE48812 | GSE48812_24h_PRECvsLNCAP.diff.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_24h_PRECvsLNCAP.diff.txt.gz-set-1 | anti-conservative | 0.01 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_24h_PRECvsLNCAP.diff.txt.gz-set-2 | anti-conservative | 0.01 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE63141 | GSE63141_eTMgly_gene_exp.diff.gz | anti-conservative | 0.78 | NA | NA | NA | Thermotoga maritima MSB8 | 243274 | FALSE | |
| GSE48812 | GSE48812_24h_PRECvsPC3.diff.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_24h_PRECvsPC3.diff.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_24h_PRECvsPC3.diff.txt.gz-set-2 | anti-conservative | 0.01 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE51037 | GSE51037_Untreated_Nitrate_Processed_CunninghamBussel.xlsx.gz | anti-conservative | 0.90 | NA | NA | NA | Mycobacterium tuberculosis H37Rv | 83332 | FALSE | |
| GSE79830 | GSE79830_Sp2_Wdr70del_vs_Sp1_Wt.Differential_analysis_results.txt.gz | anti-conservative | 0.72 | NA | NA | NA | Schizosaccharomyces pombe | 4896 | FALSE | |
| GSE56346 | GSE56346_wtNplus_vs_wtNminus_DESeq_output.txt.gz | anti-conservative | 0.36 | anti-conservative | 0.23 | Phaeodactylum tricornutum | 2850 | FALSE | ||
| GSE48812 | GSE48812_6h_LNCAP_SFN.diff.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_6h_LNCAP_SFN.diff.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_6h_LNCAP_SFN.diff.txt.gz-set-2 | anti-conservative | 0.01 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE50708 | GSE50708_DE_result.txt.gz | anti-conservative | 0.32 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE48812 | GSE48812_6h_LNCAPvsPC3.diff.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_6h_LNCAPvsPC3.diff.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_6h_LNCAPvsPC3.diff.txt.gz-set-2 | anti-conservative | 0.01 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE43143 | GSE43143_tooth_FPKM_DE.txt.gz-set-0 | anti-conservative | 0.65 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE43143 | GSE43143_tooth_FPKM_DE.txt.gz-set-1 | anti-conservative | 0.99 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE43143 | GSE43143_tooth_FPKM_DE.txt.gz-set-2 | anti-conservative | 0.82 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE45788 | GSE45788_S72_2_RefII_S72_1_Emf_exp.cuff.gz | anti-conservative | 0.83 | NA | NA | NA | Enterococcus faecalis | 1351 | FALSE | |
| GSE48812 | GSE48812_6h_PC3_SFN.diff.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_6h_PC3_SFN.diff.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_6h_PC3_SFN.diff.txt.gz-set-2 | anti-conservative | 0.01 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE99944 | GSE99944_Digo_expression_SD-T50nM_SD-Ctrl.csv.gz | anti-conservative | 0.48 | anti-conservative | 0.34 | Homo sapiens | 9606 | FALSE | ||
| GSE83218 | GSE83218_HSC.txt.gz | anti-conservative | 0.88 | anti-conservative | 0.77 | Mus musculus | 10090 | FALSE | ||
| GSE48812 | GSE48812_6h_PREC_SFN.diff.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_6h_PREC_SFN.diff.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_6h_PREC_SFN.diff.txt.gz-set-2 | anti-conservative | 0.01 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE99944 | GSE99944_Digo_expression_results_significatif.xlsx-sheet-padj<=0.05 UP | anti-conservative | 0.00 | anti-conservative | 0.00 | Homo sapiens | 9606 | FALSE | ||
| GSE99944 | GSE99944_Digo_expression_results_significatif.xlsx-sheet-padj<=0.05 DOWN | anti-conservative | 0.00 | anti-conservative | 0.00 | Homo sapiens | 9606 | FALSE | ||
| GSE99944 | GSE99944_Digo_expression_results_significatif.xlsx-sheet-padj<=0.05 | anti-conservative | 0.00 | anti-conservative | 0.00 | Homo sapiens | 9606 | FALSE | ||
| GSE99944 | GSE99944_Digo_expression_results_significatif.xlsx-sheet-padj<=0.10 UP | anti-conservative | 0.01 | anti-conservative | 0.01 | Homo sapiens | 9606 | FALSE | ||
| GSE99944 | GSE99944_Digo_expression_results_significatif.xlsx-sheet-padj<=0.10 DOWN | anti-conservative | 0.01 | anti-conservative | 0.01 | Homo sapiens | 9606 | FALSE | ||
| GSE99944 | GSE99944_Digo_expression_results_significatif.xlsx-sheet-padj<=0.10 | anti-conservative | 0.01 | anti-conservative | 0.01 | Homo sapiens | 9606 | FALSE | ||
| GSE85385 | GSE85385_RNA-seq_Mouse_Cell_Lines.xlsx-sheet-H3WT_DMSO_x_K27M_DMSO | anti-conservative | 0.78 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE85385 | GSE85385_RNA-seq_Mouse_Cell_Lines.xlsx-sheet-H3WT_DMSO_x_H3WT_EPZ | anti-conservative | 0.84 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE85385 | GSE85385_RNA-seq_Mouse_Cell_Lines.xlsx-sheet-K27M_DMSO_x_K27M_EPZ | anti-conservative | 0.85 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE93774 | GSE93774_Full_gene_list-Control_vs_KO.csv.gz | anti-conservative | 0.61 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE48812 | GSE48812_6h_PRECvsLNCAP.diff.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_6h_PRECvsLNCAP.diff.txt.gz-set-1 | anti-conservative | 0.01 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_6h_PRECvsLNCAP.diff.txt.gz-set-2 | anti-conservative | 0.01 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE93339 | GSE93339_e125_lung_DEG.txt.gz | anti-conservative | 0.02 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE56169 | GSE56169_normalized_RNASeq_Ctrl_vs_E2a.txt.gz | anti-conservative | 0.37 | NA | NA | NA | Xenopus tropicalis | 8364 | FALSE | |
| GSE56169 | GSE56169_normalized_RNASeq_Ctrl_vs_E2a.txt.gz | anti-conservative | 0.37 | NA | NA | NA | Xenopus tropicalis | 8364 | FALSE | |
| GSE48812 | GSE48812_6h_PRECvsPC3.diff.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_6h_PRECvsPC3.diff.txt.gz-set-1 | anti-conservative | 0.01 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48812 | GSE48812_6h_PRECvsPC3.diff.txt.gz-set-2 | anti-conservative | 0.01 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE83541 | GSE83541_All_Genes_ZnfTG_Muscle_DESeq2_38.txt.gz | anti-conservative | 0.82 | anti-conservative | 0.70 | Mus musculus | 10090 | FALSE | ||
| GSE63836 | GSE63836_C15Dx_versus_Untr.DESeq.txt.gz | anti-conservative | 0.63 | anti-conservative | 0.42 | Mus musculus | 10090 | FALSE | ||
| GSE98526 | GSE98526_A12_vs_UA159T5.txt.gz | anti-conservative | 0.58 | NA | NA | NA | Streptococcus mutans UA159 | 210007 | FALSE | |
| GSE89004 | GSE89004_ppGpp0_vs_H78_differential_all.xls.gz | anti-conservative | 0.44 | anti-conservative | 0.21 | Pseudomonas protegens | 380021 | FALSE | ||
| GSE75962 | GSE75962_control_vs_H2O2.DEseq.txt.gz | anti-conservative | 0.77 | anti-conservative | 0.69 | Homo sapiens | 9606 | FALSE | ||
| GSE78824 | GSE78824_Cuffdiff_transcript_differential_expression_testing.tab.gz | anti-conservative | 0.78 | NA | NA | NA | Cryptococcus neoformans var. grubii H99 | 235443 | FALSE | |
| GSE66148 | GSE66148_NC_v_CNS.txt.gz-set-0 | anti-conservative | 0.55 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE66148 | GSE66148_NC_v_CNS.txt.gz-set-0 | anti-conservative | 0.55 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE66148 | GSE66148_NC_v_CNS.txt.gz-set-1 | anti-conservative | 0.52 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE66148 | GSE66148_NC_v_CNS.txt.gz-set-1 | anti-conservative | 0.52 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE66148 | GSE66148_NC_v_CNS.txt.gz-set-2 | anti-conservative | 0.54 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE66148 | GSE66148_NC_v_CNS.txt.gz-set-2 | anti-conservative | 0.54 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE64242 | GSE64242_cufdiff_isoform_exp.diff.gz | anti-conservative | 0.93 | NA | NA | NA | Brassica juncea | 3707 | FALSE | |
| GSE59980 | GSE59980_RNA-seq_598-SKD.txt.gz-set-1 | anti-conservative | 0.39 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE98526 | GSE98526_A1_vs_UA159T5.txt.gz | anti-conservative | 0.80 | NA | NA | NA | Streptococcus mutans UA159 | 210007 | FALSE | |
| GSE70141 | GSE70141_Ax2_0H_1+2_ChdC_0H_1+2_DESeq.results.genenames.txt.gz | anti-conservative | 0.61 | anti-conservative | 0.38 | Dictyostelium discoideum | 44689 | FALSE | ||
| GSE70141 | GSE70141_Ax2_0H_1_2_Ax2_10H_1_2_DESeq.results.genenames.txt.gz | anti-conservative | 0.22 | anti-conservative | 0.06 | Dictyostelium discoideum | 44689 | FALSE | ||
| GSE84737 | GSE84737_All_genes_unfiltered_DE.txt.gz | anti-conservative | 0.45 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE80176 | GSE80176_HMLER_Ctrl_vs_DAC_Cuffdiff.txt.gz | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73893 | GSE73893_DEseq-rip_significant_sites.txt.gz | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE98526 | GSE98526_UA159T5_vs_UA159T0.txt.gz | anti-conservative | 0.93 | NA | NA | NA | Streptococcus mutans UA159 | 210007 | FALSE | |
| GSE70141 | GSE70141_Ax2_10H_1_2_ChdC_12H_1_2_DESeq.results.genenames.txt.gz | anti-conservative | 0.30 | anti-conservative | 0.15 | Dictyostelium discoideum | 44689 | FALSE | ||
| GSE84737 | GSE84737_Genes_filtered_DE.txt.gz | anti-conservative | 0.47 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE73376 | GSE73376_full_list_edgeR_annotated_DGCR8.txt.gz | anti-conservative | 0.80 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73376 | GSE73376_full_list_edgeR_annotated_DGCR8.txt.gz | anti-conservative | 0.80 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE75147 | GSE75147_regulated.phf5a_kd_402.down.G166.list.txt.gz | anti-conservative | 0.02 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE99170 | GSE99170_NormalizedData.xls.gz-sheet-normalized data | anti-conservative | 0.00 | NA | NA | NA | Saccharomyces cerevisiae | 4932 | FALSE | |
| GSE74103 | GSE74103_Tobacco_FS_v_WT_DESeq_refGene.all.annotated.txt.gz | anti-conservative | 0.62 | anti-conservative | 0.53 | Nicotiana tabacum | 4097 | FALSE | ||
| GSE71185 | GSE71185_CHD8_CRISPR_RNASeq_Cuffdiff_PolyA.txt.gz | anti-conservative | 0.38 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE73376 | GSE73376_full_list_edgeR_annotated_RRP6.txt.gz | anti-conservative | 0.82 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73376 | GSE73376_full_list_edgeR_annotated_RRP6.txt.gz | anti-conservative | 0.82 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE93684 | GSE93684_S1-1A-vs-R1-1A.compare.txt.gz | anti-conservative | 0.30 | NA | NA | NA | Haloxylon ammodendron | 151230 | FALSE | |
| GSE74103 | GSE74103_Tobacco_G1_v_WT_DESeq_refGene.all.annotated.txt.gz | anti-conservative | 0.42 | anti-conservative | 0.27 | Nicotiana tabacum | 4097 | FALSE | ||
| GSE71185 | GSE71185_CHD8_Knockdown_RNASeq_Cuffdiff_PolyA.txt.gz | anti-conservative | 0.47 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE90977 | GSE90977_RNA-seq_COMPLETE_4Con-4CJD_SETS_DEFINITIVE_log2FC_0.5.xlsx.gz-sheet-120 dpi | anti-conservative | 0.06 | anti-conservative | 0.01 | Mus musculus | 10090 | FALSE | ||
| GSE90977 | GSE90977_RNA-seq_COMPLETE_4Con-4CJD_SETS_DEFINITIVE_log2FC_0.5.xlsx.gz-sheet-180 dpi | anti-conservative | 0.10 | anti-conservative | 0.05 | Mus musculus | 10090 | FALSE | ||
| GSE74103 | GSE74103_Tobacco_GS_v_WT_DESeq_refGene.all.annotated.txt.gz | anti-conservative | 0.29 | anti-conservative | 0.23 | Nicotiana tabacum | 4097 | FALSE | ||
| GSE71185 | GSE71185_NSD3_Knockdown_RNASeq_Cuffdiff_NSR.txt.gz | anti-conservative | 0.90 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE75147 | GSE75147_regulated.phf5a_kd_861.down.0827.list.txt.gz | anti-conservative | 0.02 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE62200 | GSE62200_Table_S4.xls.gz-sheet-Table S5 N2Y6-M VS LYP9-M | anti-conservative | 0.81 | NA | NA | NA | Oryza sativa | 4530 | FALSE | |
| GSE90977 | GSE90977_RNA_seq_COMPLETE_4_4_SETS_DEFINITIVE.xlsx.gz-sheet-120 dpi | anti-conservative | 0.54 | anti-conservative | 0.37 | Mus musculus | 10090 | FALSE | ||
| GSE90977 | GSE90977_RNA_seq_COMPLETE_4_4_SETS_DEFINITIVE.xlsx.gz-sheet-180 dpi | anti-conservative | 0.82 | anti-conservative | 0.83 | Mus musculus | 10090 | FALSE | ||
| GSE95687 | GSE95687_sleuthResults.txt.gz | anti-conservative | 0.71 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE71185 | GSE71185_NSD3_Knockdown_RNASeq_Cuffdiff_PolyA.txt.gz | anti-conservative | 0.77 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE75147 | GSE75147_regulated.phf5a_kd_861.down.G166.list.txt.gz | anti-conservative | 0.01 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE77398 | GSE77398_mal_all6_cuffdiff_genes.xls.gz | anti-conservative | 0.76 | NA | NA | NA | Plasmodium falciparum | 5833 | FALSE | |
| GSE67646 | GSE67646_DESeq_1.10.1.txt.gz | anti-conservative | 0.67 | anti-conservative | 0.25 | Drosophila melanogaster | 7227 | FALSE | ||
| GSE90478 | GSE90478_Candidates_B_v_A_withNormData.csv.gz | anti-conservative | 0.00 | anti-conservative | 0.00 | Mus musculus | 10090 | FALSE | ||
| GSE75147 | GSE75147_regulated.phf5a_kd_861.up.G166.list.txt.gz | anti-conservative | 0.04 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE54846 | GSE54846_130529.DESeq.120813.combined-htseq-Luc123-m1_123.HGNC.protein_coding.rsgt20.txt.gz | anti-conservative | 0.79 | anti-conservative | 0.45 | Homo sapiens | 9606 | FALSE | ||
| GSE90478 | GSE90478_Candidates_D_v_B_withNormData_CL.csv.gz | anti-conservative | 0.00 | anti-conservative | 0.00 | Mus musculus | 10090 | FALSE | ||
| GSE80354 | GSE80354_Gata6_DEseq2_res.csv.gz | anti-conservative | 0.78 | anti-conservative | 0.87 | Mus musculus | 10090 | FALSE | ||
| GSE80354 | GSE80354_Gata6_DEseq2_res.csv.gz | anti-conservative | 0.78 | anti-conservative | 0.87 | Mus musculus | 10090 | FALSE | ||
| GSE94534 | GSE94534_MSTR_gene-P005_FC1.2_FPKM2.txt.gz | anti-conservative | 0.02 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE79916 | GSE79916_Dataset_S1-JUM_output_for_differential_AS_analyses_of_PSIdeltaAB_and_full-length_PSI_male_fly_heads.xls.gz | anti-conservative | 0.13 | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE78240 | GSE78240_DESeq_Output.txt.gz | anti-conservative | 0.66 | anti-conservative | 0.59 | Mus musculus | 10090 | FALSE | ||
| GSE73887 | GSE73887_C6661_EBNA1_vs_C6661_IgG.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_C6661_IgG.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_C6661_IgG.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_C6661_IgG.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE80135 | GSE80135_Lipo_siProx_SC_results.csv.gz | anti-conservative | 0.95 | anti-conservative | 0.82 | Homo sapiens | 9606 | FALSE | ||
| GSE73887 | GSE73887_C6661_EBNA1_vs_LCL_EBNA1.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_LCL_EBNA1.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_LCL_EBNA1.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_LCL_EBNA1.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE44402 | GSE44402_QW_Table_S2-AS_targets_of_PQBP1_identified_from_RNA-seq.xlsx.gz | anti-conservative | 0.23 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE79916 | GSE79916_Dataset_S4-DESeq2_output_for_differential_overall_gene_expression_level_analysis_of_PSIdeltaAB_and_full-length_PSI_male_fly_heads.xls.gz | anti-conservative | 0.00 | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_MUTU_EBNA1.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_MUTU_EBNA1.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_MUTU_EBNA1.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_MUTU_EBNA1.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE72390 | GSE72390_DiffExpr_Location_7-12_vs_1-6_Oncorhynchus_keta_de_novo.xlsx | anti-conservative | 0.90 | anti-conservative | 0.79 | Oncorhynchus keta | 8018 | FALSE | ||
| GSE85329 | GSE85329_IGF_project_IGF_results.txt.gz | anti-conservative | 0.69 | anti-conservative | 0.55 | Mus musculus | 10090 | FALSE | ||
| GSE73887 | GSE73887_C6661_EBNA1_vs_RAJI_EBNA1.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_RAJI_EBNA1.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_RAJI_EBNA1.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_RAJI_EBNA1.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE75832 | GSE75832_DifferentialExpression_groupwise_comparisons.xlsx-sheet-P14_P2_gene_exp_down | anti-conservative | 0.76 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_combine_IgG.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_combine_IgG.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_combine_IgG.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_combine_IgG.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE56253 | GSE56253_GeneSpring_NGS_processed_data.txt.gz | anti-conservative | 0.00 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE52402 | GSE52402_B19P16_B20P3_RPKM.txt.gz | anti-conservative | 0.63 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE85321 | GSE85321_Supplemental_Table_4_YAR_vs_YAD_RNA_seq_.xls.gz-sheet-EV_YAD_YAR_isoformexp | anti-conservative | 0.46 | NA | NA | NA | Saccharomyces cerevisiae | 4932 | FALSE | |
| GSE80135 | GSE80135_siNeg_siProx_sig_results.csv.gz | anti-conservative | 0.79 | anti-conservative | 0.50 | Homo sapiens | 9606 | FALSE | ||
| GSE73887 | GSE73887_C6661_EBNA1_vs_combine_IgG_3.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_combine_IgG_3.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_combine_IgG_3.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_combine_IgG_3.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE77427 | GSE77427_table_S1.xls.gz | anti-conservative | 0.00 | NA | NA | NA | Brassica rapa subsp. pekinensis | 51351 | FALSE | |
| GSE74993 | GSE74993_SupplementalTables.xlsx-sheet-Table S1 | anti-conservative | 0.50 | anti-conservative | 0.33 | Mus musculus | 10090 | FALSE | ||
| GSE74993 | GSE74993_SupplementalTables.xlsx-sheet-Table S3 | anti-conservative | 0.68 | anti-conservative | 0.46 | Mus musculus | 10090 | FALSE | ||
| GSE71902 | GSE71902_WILD-vs-CPH2.txt.gz | anti-conservative | 0.83 | NA | NA | NA | Candida albicans | 5476 | FALSE | |
| GSE61954 | GSE61954_all_genes_expression_values_supp_table.txt.gz | anti-conservative | 0.77 | anti-conservative | 0.59 | Zea mays | 4577 | FALSE | ||
| GSE61954 | GSE61954_all_genes_expression_values_supp_table.txt.gz | anti-conservative | 0.77 | anti-conservative | 0.59 | Zea mays | 4577 | FALSE | ||
| GSE97421 | GSE97421_GFP_RFP.txt.gz | anti-conservative | 0.57 | anti-conservative | 0.31 | Danio rerio | 7955 | FALSE | ||
| GSE73887 | GSE73887_LCL_EBNA1_vs_C6661_EBNA1.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_C6661_EBNA1.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_C6661_EBNA1.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_C6661_EBNA1.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE62785 | GSE62785_Table_S1_Genes_differentially_expressed_in_hns_mutant_in_mid-exponential_phase.xls.gz-sheet-status = OK | anti-conservative | 0.86 | NA | NA | NA | Vibrio cholerae | 666 | FALSE | |
| GSE97421 | GSE97421_GFP_Whole.txt.gz | anti-conservative | 0.34 | anti-conservative | 0.04 | Danio rerio | 7955 | FALSE | ||
| GSE81128 | GSE81128_DESeq2_Results.txt.gz | anti-conservative | 0.32 | anti-conservative | 0.14 | Tetranychus urticae | 32264 | FALSE | ||
| GSE71710 | GSE71710_siDGCR8_v_siSCR_DESeq_gencode.all.symbol.txt.gz | anti-conservative | 0.84 | anti-conservative | 0.79 | Homo sapiens | 9606 | FALSE | ||
| GSE75731 | GSE75731_ckvsd119a_gene_exp_diff.txt.gz | anti-conservative | 0.49 | NA | NA | NA | Staphylococcus aureus subsp. aureus str. Newman | 426430 | FALSE | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_LCL_IgG.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_LCL_IgG.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_LCL_IgG.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_LCL_IgG.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE65072 | GSE65072_DESeq_plusDOX_minusDOX.xlsx | anti-conservative | 0.55 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE62785 | GSE62785_Table_S2_Genes_differentially_expressed_in_hns_mutant_in_early_stationary_phase.xls.gz-sheet-status = ok | anti-conservative | 0.78 | NA | NA | NA | Vibrio cholerae | 666 | FALSE | |
| GSE75731 | GSE75731_ckvsdrug_gene_exp_diff.txt.gz | anti-conservative | 0.64 | NA | NA | NA | Staphylococcus aureus subsp. aureus str. Newman | 426430 | FALSE | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_MUTU_EBNA1.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_MUTU_EBNA1.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_MUTU_EBNA1.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_MUTU_EBNA1.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE71916 | GSE71916_Expression_Cufflinks_siRbfox1_3+EGFP_compared_to_siNT+EGFP.txt.gz | anti-conservative | 0.96 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE65935 | GSE65935_DKOrvsDKOnr_diffexp.txt.gz | anti-conservative | 0.53 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE33141 | GSE33141_BWADETsKOvsWT2.xls.gz-sheet-DETs-FC1.5-pval0.05 | anti-conservative | 0.01 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE96626 | GSE96626_DE_TrtVsVeh.xlsx | anti-conservative | 0.89 | anti-conservative | 0.87 | Mus musculus | 10090 | FALSE | ||
| GSE85360 | GSE85360_P140_Setd1b_DEGS_021015.txt.gz | anti-conservative | 0.00 | anti-conservative | 0.00 | Mus musculus | 10090 | FALSE | ||
| GSE89773 | GSE89773_combined_expression_table.txt.gz-set-0 | anti-conservative | 0.41 | anti-conservative | 0.21 | Mycolicibacterium smegmatis | 1772 | FALSE | ||
| GSE89773 | GSE89773_combined_expression_table.txt.gz-set-1 | anti-conservative | 0.50 | anti-conservative | 0.26 | Mycolicibacterium smegmatis | 1772 | FALSE | ||
| GSE75731 | GSE75731_ckvsv149a_gene_exp_diff.txt.gz | anti-conservative | 0.73 | NA | NA | NA | Staphylococcus aureus subsp. aureus str. Newman | 426430 | FALSE | |
| GSE66506 | GSE66506_DE_analysis_010714.xlsx-sheet-SigGenes | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE65935 | GSE65935_WTvsDKOnr_diffexp.txt.gz | anti-conservative | 0.49 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE59814 | GSE59814_processed_data.txt.gz | anti-conservative | 0.53 | NA | NA | NA | Saccharomyces cerevisiae | 4932 | FALSE | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_combine_IgG.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_combine_IgG.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_combine_IgG.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_combine_IgG.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE65935 | GSE65935_WTvsDKOr_diffexp.txt.gz | anti-conservative | 0.47 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE33141 | GSE33141_TopHatDETsKOvsWT.xls.gz | anti-conservative | 0.01 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE77218 | GSE77218_A3_A2.xlsx-sheet-diff_list | anti-conservative | 0.00 | NA | NA | NA | Vitis vinifera | 29760 | FALSE | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_combine_IgG_3.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_combine_IgG_3.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_combine_IgG_3.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_combine_IgG_3.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48166 | GSE48166_Cufflinks_FPKM.txt.gz | anti-conservative | 0.95 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48166 | GSE48166_Cufflinks_FPKM.txt.gz | anti-conservative | 0.95 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE77218 | GSE77218_A4_A2.xlsx-sheet-diff_list | anti-conservative | 0.00 | NA | NA | NA | Vitis vinifera | 29760 | FALSE | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_C6661_EBNA1.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_C6661_EBNA1.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_C6661_EBNA1.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_C6661_EBNA1.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE65973 | GSE65973_NLS_deseq2_all_alluniq_vs_mmu9htdp43nls.txt.gz | anti-conservative | 0.37 | anti-conservative | 0.31 | Mus musculus | 10090 | FALSE | ||
| GSE90889 | GSE90889_geo_hiPSC-RPE_Vehicle_vs_NAM.xlsx | anti-conservative | 0.69 | anti-conservative | 0.65 | Homo sapiens | 9606 | FALSE | ||
| GSE92282 | GSE92282_Results.csv.gz | anti-conservative | 0.00 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE77218 | GSE77218_A4_A3.xlsx-sheet-diff_list | anti-conservative | 0.00 | NA | NA | NA | Vitis vinifera | 29760 | FALSE | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_LCL_EBNA1.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_LCL_EBNA1.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_LCL_EBNA1.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_LCL_EBNA1.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE74920 | GSE74920_SupplementalTable1.xlsx.gz | anti-conservative | 0.50 | anti-conservative | 0.33 | Mus musculus | 10090 | FALSE | ||
| GSE65487 | GSE65487_deseq.rminus_rplus.ensembl.csv.gz | anti-conservative | 0.67 | anti-conservative | 0.32 | Mus musculus | 10090 | FALSE | ||
| GSE97174 | GSE97174_DEseq_DifferentialGeneExpression.txt.gz | anti-conservative | 0.00 | NA | NA | NA | Arabidopsis thaliana | 3702 | FALSE | |
| GSE71539 | GSE71539_TP0vsTP23_gene_results.txt.gz | anti-conservative | 0.86 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_MUTU_IgG.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_MUTU_IgG.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_MUTU_IgG.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_MUTU_IgG.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE74920 | GSE74920_SupplementalTable3.xlsx.gz | anti-conservative | 0.68 | anti-conservative | 0.46 | Mus musculus | 10090 | FALSE | ||
| GSE71539 | GSE71539_TP0vsTP23_tag_results.txt.gz | anti-conservative | 0.85 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE65487 | GSE65487_deseq.rplus_gplus.ensembl.csv.gz | anti-conservative | 0.50 | anti-conservative | 0.19 | Mus musculus | 10090 | FALSE | ||
| GSE54440 | GSE54440_WT_Z2_RNAseq_rep2.txt.gz | anti-conservative | 0.51 | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE79039 | GSE79039_Feske_Tcon_DKO_vs_WT_norm_counts_DE_expression_all.txt.gz | anti-conservative | 0.62 | anti-conservative | 0.41 | Mus musculus | 10090 | FALSE | ||
| GSE75993 | GSE75993_processed_data.xls.gz-sheet-1_WT_vs_KO_DESeq_All | anti-conservative | 0.94 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_combine_IgG.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_combine_IgG.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_combine_IgG.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_combine_IgG.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE41766 | GSE41766_IBH1-Ox_vs_Col.txt.gz | anti-conservative | 0.00 | anti-conservative | 0.00 | Arabidopsis thaliana | 3702 | FALSE | ||
| GSE79039 | GSE79039_Feske_Tfh_DKO_vs_WT_norm_counts_DE_expression_all.txt.gz | anti-conservative | 0.73 | anti-conservative | 0.52 | Mus musculus | 10090 | FALSE | ||
| GSE73887 | GSE73887_MUTU_EBNA1_vs_combine_IgG_3.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_combine_IgG_3.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_combine_IgG_3.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_combine_IgG_3.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE41766 | GSE41766_PRE1-Ox_IBH1-Ox_vs_IBH1-Ox.txt.gz | anti-conservative | 0.62 | anti-conservative | 0.29 | Arabidopsis thaliana | 3702 | FALSE | ||
| GSE63224 | GSE63224_All_unigene_expression.txt.gz-set-5 | anti-conservative | 0.94 | NA | NA | NA | Fragaria x ananassa | 3747 | FALSE | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_C6661_EBNA1.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_C6661_EBNA1.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_C6661_EBNA1.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_C6661_EBNA1.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE67334 | GSE67334_TFH.Vs.TH1.DESeq_Analysis_DE_Genes.txt.gz | anti-conservative | 0.79 | anti-conservative | 0.56 | Mus musculus | 10090 | FALSE | ||
| GSE63224 | GSE63224_Degradome_result.xlsx | anti-conservative | 0.00 | NA | NA | NA | Fragaria x ananassa | 3747 | FALSE | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_LCL_EBNA1.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_LCL_EBNA1.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_LCL_EBNA1.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_LCL_EBNA1.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE71862 | GSE71862_DeSeq2_MCF7_vs_MCF10A_foldchange.txt.gz | anti-conservative | 0.46 | anti-conservative | 0.45 | Homo sapiens | 9606 | FALSE | ||
| GSE80349 | GSE80349_results.txt.gz-set-0 | anti-conservative | 0.07 | NA | NA | NA | Schizosaccharomyces pombe | 4896 | FALSE | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_MUTU_EBNA1.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_MUTU_EBNA1.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_MUTU_EBNA1.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_MUTU_EBNA1.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE48671 | GSE48671_all.GeneDiffExp.txt.gz-set-0 | anti-conservative | 0.27 | NA | NA | NA | Dorcoceras hygrometricum | 472368 | FALSE | |
| GSE48671 | GSE48671_all.GeneDiffExp.txt.gz-set-1 | anti-conservative | 0.16 | NA | NA | NA | Dorcoceras hygrometricum | 472368 | FALSE | |
| GSE92506 | GSE92506_DEseq2_wholeTable.txt.gz | anti-conservative | 0.64 | anti-conservative | 0.42 | Homo sapiens | 9606 | FALSE | ||
| GSE47773 | GSE47773_Matrix_table.txt.gz | anti-conservative | 0.00 | NA | NA | NA | Shewanella piezotolerans WP3 | 225849 | FALSE | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_RAJI_IgG.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_RAJI_IgG.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_RAJI_IgG.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_RAJI_IgG.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE36781 | GSE36781_gene_exp_diff.txt.gz | anti-conservative | 0.96 | NA | NA | NA | Alternaria brassicicola | 29001 | FALSE | |
| GSE40478 | GSE40478_output_score.txt.gz | anti-conservative | 0.32 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE63510 | GSE63510_ko_vs_wt_fold_changes_p_values.txt.gz | anti-conservative | 0.54 | anti-conservative | 0.29 | Mus musculus | 10090 | FALSE | ||
| GSE71093 | GSE71093_a456_vs_a123_sig.txt.gz | anti-conservative | 0.02 | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_combine_IgG.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_combine_IgG.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_combine_IgG.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_combine_IgG.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE61491 | GSE61491_CHDKD_differential_expression.txt.gz | anti-conservative | 0.95 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE57580 | GSE57580_different_expressed_gene_list_between_gynoecious_vs_monoecious.txt.gz | anti-conservative | 0.00 | NA | NA | NA | Cucumis melo | 3656 | FALSE | |
| GSE87167 | GSE87167_all_genes.txt.gz | anti-conservative | 0.38 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE61290 | GSE61290_Scr_Vs_shMyb.txt.gz | anti-conservative | 0.04 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE64359 | GSE64359_DE_dfwt_combined.txt.gz | anti-conservative | 0.00 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_combine_IgG_3.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_combine_IgG_3.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_combine_IgG_3.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_combine_IgG_3.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE37682 | GSE37682_RAW.txt.gz | anti-conservative | 0.69 | NA | NA | NA | Candida albicans | 5476 | FALSE | |
| GSE81059 | GSE81059_cns-control_vs_head-control.csv.gz | anti-conservative | 0.51 | anti-conservative | 0.13 | Schmidtea mediterranea | 79327 | FALSE | ||
| GSE66793 | GSE66793_cmp1-3-geo-gene.tsv.gz | anti-conservative | 0.86 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE69001 | GSE69001_DE_list_planktonic_v_biolfim.txt.gz | anti-conservative | 0.44 | NA | NA | NA | Clostridioides difficile R20291 | 645463 | FALSE | |
| GSE72293 | GSE72293_E17_vs_P9_filtered_rpkm5.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE72293 | GSE72293_E17_vs_P9_filtered_rpkm5.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE58495 | GSE58495_diffexp_LSK.txt.gz-set-0 | anti-conservative | 0.66 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE58495 | GSE58495_diffexp_LSK.txt.gz-set-1 | anti-conservative | 0.58 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE69001 | GSE69001_DE_list_planktonic_v_plate.txt.gz | anti-conservative | 0.33 | NA | NA | NA | Clostridioides difficile R20291 | 645463 | FALSE | |
| GSE63948 | GSE63948_Supplemental_Table2_DeepSeq_Fanourgakis_etAl.xls.gz-sheet-short 3’UTR transcripts(<350nt) | anti-conservative | 0.90 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE63948 | GSE63948_Supplemental_Table2_DeepSeq_Fanourgakis_etAl.xls.gz-sheet-medium 3’UTR transcripts | anti-conservative | 0.95 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE63948 | GSE63948_Supplemental_Table2_DeepSeq_Fanourgakis_etAl.xls.gz-sheet-long 3’UTR transcripts(>1500nt) | anti-conservative | 0.87 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE67756 | GSE67756_LA2A-vs-LC2A.compare.txt.gz | anti-conservative | 0.42 | NA | NA | NA | Larimichthys crocea | 215358 | FALSE | |
| GSE81913 | GSE81913_iRed_over_disGran_foldchange.xlsx.gz-sheet-4-5-2016_gran_v_iRed.csv | anti-conservative | 0.61 | anti-conservative | 0.43 | Danio rerio | 7955 | FALSE | ||
| GSE81913 | GSE81913_iRed_over_disGran_foldchange.xlsx.gz-sheet-Up | anti-conservative | 0.46 | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE81913 | GSE81913_iRed_over_disGran_foldchange.xlsx.gz-sheet-Down | anti-conservative | 0.58 | anti-conservative | 0.48 | Danio rerio | 7955 | FALSE | ||
| GSE69001 | GSE69001_DE_list_plate_v_biofilm.txt.gz | anti-conservative | 0.38 | NA | NA | NA | Clostridioides difficile R20291 | 645463 | FALSE | |
| GSE67756 | GSE67756_LA2A-vs-LC2A.diff_annot.txt.gz | anti-conservative | 0.00 | NA | NA | NA | Larimichthys crocea | 215358 | FALSE | |
| GSE41873 | GSE41873_FPKM_all_genes_from_CuffDiff.txt.gz | anti-conservative | 0.74 | NA | NA | NA | Plasmodium yoelii yoelii 17XNL | 352914 | FALSE | |
| GSE86211 | GSE86211_CmrA_transcriptome_Expression_of_all_genes.xlsx-sheet-PA14vsPJ01 | anti-conservative | 0.93 | NA | NA | NA | Pseudomonas aeruginosa | 287 | FALSE | |
| GSE86211 | GSE86211_CmrA_transcriptome_Expression_of_all_genes.xlsx-sheet-PJ01vsPJ01dT | anti-conservative | 0.96 | NA | NA | NA | Pseudomonas aeruginosa | 287 | FALSE | |
| GSE77025 | GSE77025_gene_exp.diff.gz | anti-conservative | 0.35 | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE53040 | GSE53040_wtDMSOvswtXP13.txt.gz | anti-conservative | 0.69 | NA | NA | NA | Neurospora crassa | 5141 | FALSE | |
| GSE68846 | GSE68846_KO_vs_Control_05.csv.gz | anti-conservative | 0.00 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE67756 | GSE67756_LB2A-vs-LA2A.compare.txt.gz | anti-conservative | 0.44 | NA | NA | NA | Larimichthys crocea | 215358 | FALSE | |
| GSE32038 | GSE32038_cds.diff.gz | anti-conservative | 0.07 | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE66158 | GSE66158_nc_vs_59_differentially_expressed_genes_FPKM_GEO.txt.gz | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE68846 | GSE68846_KO_vs_Control_10.csv.gz | anti-conservative | 0.00 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE67756 | GSE67756_LB2A-vs-LA2A.diff_annot.txt.gz | anti-conservative | 0.00 | NA | NA | NA | Larimichthys crocea | 215358 | FALSE | |
| GSE81043 | GSE81043_sh109_final_unique_DESeq_InfFixed_DiffExp.xlsx.gz | anti-conservative | 0.48 | anti-conservative | 0.14 | Homo sapiens | 9606 | FALSE | ||
| GSE68846 | GSE68846_KO_vs_Control_15.csv.gz | anti-conservative | 0.01 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE67756 | GSE67756_LB2A-vs-LC2A.compare.txt.gz | anti-conservative | 0.53 | NA | NA | NA | Larimichthys crocea | 215358 | FALSE | |
| GSE41367 | GSE41367_brenneri_gns.expr.txt.gz | anti-conservative | 0.36 | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE41367 | GSE41367_brenneri_gns.expr.txt.gz | anti-conservative | 0.36 | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE41367 | GSE41367_brenneri_gns.expr.txt.gz | anti-conservative | 0.36 | NA | NA | NA | Caenorhabditis briggsae | 6238 | FALSE | |
| GSE41367 | GSE41367_brenneri_gns.expr.txt.gz | anti-conservative | 0.36 | NA | NA | NA | Caenorhabditis japonica | 281687 | FALSE | |
| GSE41367 | GSE41367_brenneri_gns.expr.txt.gz | anti-conservative | 0.36 | NA | NA | NA | Caenorhabditis japonica | 281687 | FALSE | |
| GSE41367 | GSE41367_brenneri_gns.expr.txt.gz | anti-conservative | 0.36 | NA | NA | NA | Caenorhabditis brenneri | 135651 | FALSE | |
| GSE41367 | GSE41367_brenneri_gns.expr.txt.gz | anti-conservative | 0.36 | NA | NA | NA | Caenorhabditis brenneri | 135651 | FALSE | |
| GSE41367 | GSE41367_brenneri_gns.expr.txt.gz | anti-conservative | 0.36 | NA | NA | NA | Caenorhabditis remanei | 31234 | FALSE | |
| GSE41367 | GSE41367_brenneri_gns.expr.txt.gz | anti-conservative | 0.36 | NA | NA | NA | Caenorhabditis remanei | 31234 | FALSE | |
| GSE97060 | GSE97060_122KOMouse_SleuthOutput.txt.gz | anti-conservative | 0.46 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE68846 | GSE68846_KO_vs_Control_20.csv.gz | anti-conservative | 0.01 | anti-conservative | 0.01 | Mus musculus | 10090 | FALSE | ||
| GSE67756 | GSE67756_LB2A-vs-LC2A.diff_annot.txt.gz | anti-conservative | 0.00 | NA | NA | NA | Larimichthys crocea | 215358 | FALSE | |
| GSE41367 | GSE41367_brenneri_soap.expr.txt.gz | anti-conservative | 0.37 | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE41367 | GSE41367_brenneri_soap.expr.txt.gz | anti-conservative | 0.37 | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE41367 | GSE41367_brenneri_soap.expr.txt.gz | anti-conservative | 0.37 | NA | NA | NA | Caenorhabditis briggsae | 6238 | FALSE | |
| GSE41367 | GSE41367_brenneri_soap.expr.txt.gz | anti-conservative | 0.37 | NA | NA | NA | Caenorhabditis japonica | 281687 | FALSE | |
| GSE41367 | GSE41367_brenneri_soap.expr.txt.gz | anti-conservative | 0.37 | NA | NA | NA | Caenorhabditis japonica | 281687 | FALSE | |
| GSE41367 | GSE41367_brenneri_soap.expr.txt.gz | anti-conservative | 0.37 | NA | NA | NA | Caenorhabditis brenneri | 135651 | FALSE | |
| GSE41367 | GSE41367_brenneri_soap.expr.txt.gz | anti-conservative | 0.37 | NA | NA | NA | Caenorhabditis brenneri | 135651 | FALSE | |
| GSE41367 | GSE41367_brenneri_soap.expr.txt.gz | anti-conservative | 0.37 | NA | NA | NA | Caenorhabditis remanei | 31234 | FALSE | |
| GSE41367 | GSE41367_brenneri_soap.expr.txt.gz | anti-conservative | 0.37 | NA | NA | NA | Caenorhabditis remanei | 31234 | FALSE | |
| GSE37001 | GSE37001_DEgenes.txt.gz | anti-conservative | 0.00 | anti-conservative | 0.00 | Homo sapiens | 9606 | FALSE | ||
| GSE64513 | GSE64513_FOXD3_vs_Control_gene_exp_diff_anno.txt.gz | anti-conservative | 0.61 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE67756 | GSE67756_LB2A-vs-LF1A.compare.txt.gz | anti-conservative | 0.49 | NA | NA | NA | Larimichthys crocea | 215358 | FALSE | |
| GSE41367 | GSE41367_briggsae_gns.expr.txt.gz | anti-conservative | 0.33 | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE41367 | GSE41367_briggsae_gns.expr.txt.gz | anti-conservative | 0.33 | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE41367 | GSE41367_briggsae_gns.expr.txt.gz | anti-conservative | 0.33 | NA | NA | NA | Caenorhabditis briggsae | 6238 | FALSE | |
| GSE41367 | GSE41367_briggsae_gns.expr.txt.gz | anti-conservative | 0.33 | NA | NA | NA | Caenorhabditis japonica | 281687 | FALSE | |
| GSE41367 | GSE41367_briggsae_gns.expr.txt.gz | anti-conservative | 0.33 | NA | NA | NA | Caenorhabditis japonica | 281687 | FALSE | |
| GSE41367 | GSE41367_briggsae_gns.expr.txt.gz | anti-conservative | 0.33 | NA | NA | NA | Caenorhabditis brenneri | 135651 | FALSE | |
| GSE41367 | GSE41367_briggsae_gns.expr.txt.gz | anti-conservative | 0.33 | NA | NA | NA | Caenorhabditis brenneri | 135651 | FALSE | |
| GSE41367 | GSE41367_briggsae_gns.expr.txt.gz | anti-conservative | 0.33 | NA | NA | NA | Caenorhabditis remanei | 31234 | FALSE | |
| GSE41367 | GSE41367_briggsae_gns.expr.txt.gz | anti-conservative | 0.33 | NA | NA | NA | Caenorhabditis remanei | 31234 | FALSE | |
| GSE38764 | GSE38764_DESeq.nbVsneuron-orig-FDR0.01.txt.gz | anti-conservative | 0.00 | anti-conservative | 0.00 | Drosophila melanogaster | 7227 | FALSE | ||
| GSE38764 | GSE38764_DESeq.nbVsneuron-orig-FDR0.01.txt.gz | anti-conservative | 0.00 | anti-conservative | 0.00 | Drosophila melanogaster | 7227 | FALSE | ||
| GSE37001 | GSE37001_DEintrons.txt.gz | anti-conservative | 0.00 | anti-conservative | 0.00 | Homo sapiens | 9606 | FALSE | ||
| GSE95108 | GSE95108_DEtest_wo_wt1.xlsx-sheet-DEtest | anti-conservative | 0.76 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE64513 | GSE64513_FOXD3_vs_Control_gene_exp_diff_sig_anno.txt.gz | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE67756 | GSE67756_LB2A-vs-LF1A.diff_annot.txt.gz | anti-conservative | 0.00 | NA | NA | NA | Larimichthys crocea | 215358 | FALSE | |
| GSE41367 | GSE41367_briggsae_soap.expr.txt.gz | anti-conservative | 0.35 | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE41367 | GSE41367_briggsae_soap.expr.txt.gz | anti-conservative | 0.35 | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE41367 | GSE41367_briggsae_soap.expr.txt.gz | anti-conservative | 0.35 | NA | NA | NA | Caenorhabditis briggsae | 6238 | FALSE | |
| GSE41367 | GSE41367_briggsae_soap.expr.txt.gz | anti-conservative | 0.35 | NA | NA | NA | Caenorhabditis japonica | 281687 | FALSE | |
| GSE41367 | GSE41367_briggsae_soap.expr.txt.gz | anti-conservative | 0.35 | NA | NA | NA | Caenorhabditis japonica | 281687 | FALSE | |
| GSE41367 | GSE41367_briggsae_soap.expr.txt.gz | anti-conservative | 0.35 | NA | NA | NA | Caenorhabditis brenneri | 135651 | FALSE | |
| GSE41367 | GSE41367_briggsae_soap.expr.txt.gz | anti-conservative | 0.35 | NA | NA | NA | Caenorhabditis brenneri | 135651 | FALSE | |
| GSE41367 | GSE41367_briggsae_soap.expr.txt.gz | anti-conservative | 0.35 | NA | NA | NA | Caenorhabditis remanei | 31234 | FALSE | |
| GSE41367 | GSE41367_briggsae_soap.expr.txt.gz | anti-conservative | 0.35 | NA | NA | NA | Caenorhabditis remanei | 31234 | FALSE | |
| GSE37001 | GSE37001_DEisoforms.txt.gz | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE41367 | GSE41367_elegans_gns.expr.txt.gz | anti-conservative | 0.30 | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE41367 | GSE41367_elegans_gns.expr.txt.gz | anti-conservative | 0.30 | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE41367 | GSE41367_elegans_gns.expr.txt.gz | anti-conservative | 0.30 | NA | NA | NA | Caenorhabditis briggsae | 6238 | FALSE | |
| GSE41367 | GSE41367_elegans_gns.expr.txt.gz | anti-conservative | 0.30 | NA | NA | NA | Caenorhabditis japonica | 281687 | FALSE | |
| GSE41367 | GSE41367_elegans_gns.expr.txt.gz | anti-conservative | 0.30 | NA | NA | NA | Caenorhabditis japonica | 281687 | FALSE | |
| GSE41367 | GSE41367_elegans_gns.expr.txt.gz | anti-conservative | 0.30 | NA | NA | NA | Caenorhabditis brenneri | 135651 | FALSE | |
| GSE41367 | GSE41367_elegans_gns.expr.txt.gz | anti-conservative | 0.30 | NA | NA | NA | Caenorhabditis brenneri | 135651 | FALSE | |
| GSE41367 | GSE41367_elegans_gns.expr.txt.gz | anti-conservative | 0.30 | NA | NA | NA | Caenorhabditis remanei | 31234 | FALSE | |
| GSE41367 | GSE41367_elegans_gns.expr.txt.gz | anti-conservative | 0.30 | NA | NA | NA | Caenorhabditis remanei | 31234 | FALSE | |
| GSE79286 | GSE79286_CYC2vsWT_Conj-2.5hr_RNA-Seq.xlsx-sheet-Significant-FULL | anti-conservative | 0.00 | NA | NA | NA | Tetrahymena thermophila | 5911 | FALSE | |
| GSE41367 | GSE41367_elegans_soap.expr.txt.gz | anti-conservative | 0.26 | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE41367 | GSE41367_elegans_soap.expr.txt.gz | anti-conservative | 0.26 | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE41367 | GSE41367_elegans_soap.expr.txt.gz | anti-conservative | 0.26 | NA | NA | NA | Caenorhabditis briggsae | 6238 | FALSE | |
| GSE41367 | GSE41367_elegans_soap.expr.txt.gz | anti-conservative | 0.26 | NA | NA | NA | Caenorhabditis japonica | 281687 | FALSE | |
| GSE41367 | GSE41367_elegans_soap.expr.txt.gz | anti-conservative | 0.26 | NA | NA | NA | Caenorhabditis japonica | 281687 | FALSE | |
| GSE41367 | GSE41367_elegans_soap.expr.txt.gz | anti-conservative | 0.26 | NA | NA | NA | Caenorhabditis brenneri | 135651 | FALSE | |
| GSE41367 | GSE41367_elegans_soap.expr.txt.gz | anti-conservative | 0.26 | NA | NA | NA | Caenorhabditis brenneri | 135651 | FALSE | |
| GSE41367 | GSE41367_elegans_soap.expr.txt.gz | anti-conservative | 0.26 | NA | NA | NA | Caenorhabditis remanei | 31234 | FALSE | |
| GSE41367 | GSE41367_elegans_soap.expr.txt.gz | anti-conservative | 0.26 | NA | NA | NA | Caenorhabditis remanei | 31234 | FALSE | |
| GSE32038 | GSE32038_promoters.diff.gz | anti-conservative | 0.05 | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE77568 | GSE77568_CHIP_DMSO_vs_JQ1.txt.gz | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE77568 | GSE77568_CHIP_DMSO_vs_JQ1.txt.gz | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE83375 | GSE83375_GB_glia.FPKM.txt.gz | anti-conservative | 0.66 | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE79286 | GSE79286_CYC2vsWT_Conj-2hr_RNA-Seq.xlsx-sheet-Significant-FULL | anti-conservative | 0.00 | NA | NA | NA | Tetrahymena thermophila | 5911 | FALSE | |
| GSE79286 | GSE79286_CYC2vsWT_Conj-2hr_RNA-Seq.xlsx-sheet-Significant-UP | anti-conservative | 0.00 | NA | NA | NA | Tetrahymena thermophila | 5911 | FALSE | |
| GSE64413 | GSE64413_orf57_pval_cutoff_0.001.csv.gz | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE41367 | GSE41367_japonica_gns.expr.txt.gz | anti-conservative | 0.29 | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE41367 | GSE41367_japonica_gns.expr.txt.gz | anti-conservative | 0.29 | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE41367 | GSE41367_japonica_gns.expr.txt.gz | anti-conservative | 0.29 | NA | NA | NA | Caenorhabditis briggsae | 6238 | FALSE | |
| GSE41367 | GSE41367_japonica_gns.expr.txt.gz | anti-conservative | 0.29 | NA | NA | NA | Caenorhabditis japonica | 281687 | FALSE | |
| GSE41367 | GSE41367_japonica_gns.expr.txt.gz | anti-conservative | 0.29 | NA | NA | NA | Caenorhabditis japonica | 281687 | FALSE | |
| GSE41367 | GSE41367_japonica_gns.expr.txt.gz | anti-conservative | 0.29 | NA | NA | NA | Caenorhabditis brenneri | 135651 | FALSE | |
| GSE41367 | GSE41367_japonica_gns.expr.txt.gz | anti-conservative | 0.29 | NA | NA | NA | Caenorhabditis brenneri | 135651 | FALSE | |
| GSE41367 | GSE41367_japonica_gns.expr.txt.gz | anti-conservative | 0.29 | NA | NA | NA | Caenorhabditis remanei | 31234 | FALSE | |
| GSE41367 | GSE41367_japonica_gns.expr.txt.gz | anti-conservative | 0.29 | NA | NA | NA | Caenorhabditis remanei | 31234 | FALSE | |
| GSE32038 | GSE32038_splicing.diff.gz | anti-conservative | 0.06 | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE74929 | GSE74929_Diff_Exp.txt.gz-set-0 | anti-conservative | 0.00 | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE74929 | GSE74929_Diff_Exp.txt.gz-set-1 | anti-conservative | 0.22 | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE77568 | GSE77568_CHIP_DMSO_vs_input.txt.gz | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE77568 | GSE77568_CHIP_DMSO_vs_input.txt.gz | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE79286 | GSE79286_CYC2vsWT_Conj-3.5hr_RNA-Seq.xlsx-sheet-Significant-FULL | anti-conservative | 0.00 | NA | NA | NA | Tetrahymena thermophila | 5911 | FALSE | |
| GSE64413 | GSE64413_orf57_pval_cutoff_0.05.csv.gz | anti-conservative | 0.04 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE41590 | GSE41590_Gene_expression.txt.gz | anti-conservative | 0.01 | anti-conservative | 0.01 | Saccharomyces cerevisiae | 4932 | FALSE | ||
| GSE41590 | GSE41590_Gene_expression.txt.gz | anti-conservative | 0.01 | anti-conservative | 0.01 | Saccharomyces cerevisiae | 4932 | FALSE | ||
| GSE57217 | GSE57217_bck1wt_geneexp_diff.txt.gz | anti-conservative | 0.73 | NA | NA | NA | Cryptococcus neoformans | 5207 | FALSE | |
| GSE41367 | GSE41367_japonica_soap.expr.txt.gz | anti-conservative | 0.29 | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE41367 | GSE41367_japonica_soap.expr.txt.gz | anti-conservative | 0.29 | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE41367 | GSE41367_japonica_soap.expr.txt.gz | anti-conservative | 0.29 | NA | NA | NA | Caenorhabditis briggsae | 6238 | FALSE | |
| GSE41367 | GSE41367_japonica_soap.expr.txt.gz | anti-conservative | 0.29 | NA | NA | NA | Caenorhabditis japonica | 281687 | FALSE | |
| GSE41367 | GSE41367_japonica_soap.expr.txt.gz | anti-conservative | 0.29 | NA | NA | NA | Caenorhabditis japonica | 281687 | FALSE | |
| GSE41367 | GSE41367_japonica_soap.expr.txt.gz | anti-conservative | 0.29 | NA | NA | NA | Caenorhabditis brenneri | 135651 | FALSE | |
| GSE41367 | GSE41367_japonica_soap.expr.txt.gz | anti-conservative | 0.29 | NA | NA | NA | Caenorhabditis brenneri | 135651 | FALSE | |
| GSE41367 | GSE41367_japonica_soap.expr.txt.gz | anti-conservative | 0.29 | NA | NA | NA | Caenorhabditis remanei | 31234 | FALSE | |
| GSE41367 | GSE41367_japonica_soap.expr.txt.gz | anti-conservative | 0.29 | NA | NA | NA | Caenorhabditis remanei | 31234 | FALSE | |
| GSE79820 | GSE79820_all_de_cuffdiff.tsv.gz | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE41367 | GSE41367_remanei_gns.expr.txt.gz | anti-conservative | 0.27 | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE41367 | GSE41367_remanei_gns.expr.txt.gz | anti-conservative | 0.27 | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE41367 | GSE41367_remanei_gns.expr.txt.gz | anti-conservative | 0.27 | NA | NA | NA | Caenorhabditis briggsae | 6238 | FALSE | |
| GSE41367 | GSE41367_remanei_gns.expr.txt.gz | anti-conservative | 0.27 | NA | NA | NA | Caenorhabditis japonica | 281687 | FALSE | |
| GSE41367 | GSE41367_remanei_gns.expr.txt.gz | anti-conservative | 0.27 | NA | NA | NA | Caenorhabditis japonica | 281687 | FALSE | |
| GSE41367 | GSE41367_remanei_gns.expr.txt.gz | anti-conservative | 0.27 | NA | NA | NA | Caenorhabditis brenneri | 135651 | FALSE | |
| GSE41367 | GSE41367_remanei_gns.expr.txt.gz | anti-conservative | 0.27 | NA | NA | NA | Caenorhabditis brenneri | 135651 | FALSE | |
| GSE41367 | GSE41367_remanei_gns.expr.txt.gz | anti-conservative | 0.27 | NA | NA | NA | Caenorhabditis remanei | 31234 | FALSE | |
| GSE41367 | GSE41367_remanei_gns.expr.txt.gz | anti-conservative | 0.27 | NA | NA | NA | Caenorhabditis remanei | 31234 | FALSE | |
| GSE57254 | GSE57254_WT_KD_CELF1_Fold_change.txt.gz | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE57217 | GSE57217_mkk2wt_geneexp_diff.txt.gz | anti-conservative | 0.80 | NA | NA | NA | Cryptococcus neoformans | 5207 | FALSE | |
| GSE41367 | GSE41367_remanei_soap.expr.txt.gz | anti-conservative | 0.25 | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE41367 | GSE41367_remanei_soap.expr.txt.gz | anti-conservative | 0.25 | NA | NA | NA | Caenorhabditis elegans | 6239 | FALSE | |
| GSE41367 | GSE41367_remanei_soap.expr.txt.gz | anti-conservative | 0.25 | NA | NA | NA | Caenorhabditis briggsae | 6238 | FALSE | |
| GSE41367 | GSE41367_remanei_soap.expr.txt.gz | anti-conservative | 0.25 | NA | NA | NA | Caenorhabditis japonica | 281687 | FALSE | |
| GSE41367 | GSE41367_remanei_soap.expr.txt.gz | anti-conservative | 0.25 | NA | NA | NA | Caenorhabditis japonica | 281687 | FALSE | |
| GSE41367 | GSE41367_remanei_soap.expr.txt.gz | anti-conservative | 0.25 | NA | NA | NA | Caenorhabditis brenneri | 135651 | FALSE | |
| GSE41367 | GSE41367_remanei_soap.expr.txt.gz | anti-conservative | 0.25 | NA | NA | NA | Caenorhabditis brenneri | 135651 | FALSE | |
| GSE41367 | GSE41367_remanei_soap.expr.txt.gz | anti-conservative | 0.25 | NA | NA | NA | Caenorhabditis remanei | 31234 | FALSE | |
| GSE41367 | GSE41367_remanei_soap.expr.txt.gz | anti-conservative | 0.25 | NA | NA | NA | Caenorhabditis remanei | 31234 | FALSE | |
| GSE80264 | GSE80264_Group_2_vs._Group_1_Ensembl.gene.rpkm_more0.5_log2p1_qn.txt.gz-set-0 | anti-conservative | 0.01 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE80264 | GSE80264_Group_2_vs._Group_1_Ensembl.gene.rpkm_more0.5_log2p1_qn.txt.gz-set-1 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE80264 | GSE80264_Group_2_vs._Group_1_Ensembl.gene.rpkm_more0.5_log2p1_qn.txt.gz-set-2 | anti-conservative | 0.02 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE80264 | GSE80264_Group_2_vs._Group_1_Ensembl.gene.rpkm_more0.5_log2p1_qn.txt.gz-set-3 | anti-conservative | 0.56 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE43189 | GSE43189_processed_h99_rim101.csv.gz | anti-conservative | 0.46 | NA | NA | NA | Cryptococcus neoformans | 5207 | FALSE | |
| GSE90615 | GSE90615_DifferentialExpression.xlsx-sheet-Vehicle_12dP-MI_vs_Pre-MI | anti-conservative | 0.48 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE90615 | GSE90615_DifferentialExpression.xlsx-sheet-Sfrp2_12dP-MI_vs_Pre-MI | anti-conservative | 0.43 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE90615 | GSE90615_DifferentialExpression.xlsx-sheet-1dP-MI_vs_Pre-MI | anti-conservative | 0.68 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE80264 | GSE80264_Group_3_vs._Group_1_Ensembl.gene.rpkm_more0.5_log2p1_qn.txt.gz-set-0 | anti-conservative | 0.01 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE80264 | GSE80264_Group_3_vs._Group_1_Ensembl.gene.rpkm_more0.5_log2p1_qn.txt.gz-set-1 | anti-conservative | 0.03 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE80264 | GSE80264_Group_3_vs._Group_1_Ensembl.gene.rpkm_more0.5_log2p1_qn.txt.gz-set-2 | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE80264 | GSE80264_Group_3_vs._Group_1_Ensembl.gene.rpkm_more0.5_log2p1_qn.txt.gz-set-3 | anti-conservative | 0.54 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE57217 | GSE57217_mpk1wt_geneexp_diff.txt.gz | anti-conservative | 0.77 | NA | NA | NA | Cryptococcus neoformans | 5207 | FALSE | |
| GSE44457 | GSE44457_Human_transcriptome_deg.txt.gz | anti-conservative | 0.00 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE94512 | GSE94512_NaPi_vs_Lys.txt.gz | anti-conservative | 0.95 | anti-conservative | 0.98 | Staphylococcus aureus | 1280 | FALSE | ||
| GSE90013 | GSE90013_cds_exp.diff_A_B_cds.txt.gz | anti-conservative | 0.03 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE75510 | GSE75510_diffExonExprZH1vsB6.txt.gz | anti-conservative | 0.94 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE67674 | GSE67674_RNA-seq_analysis_PBSDMSOvsPBSGSK-J4.txt.gz | anti-conservative | 0.95 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE62448 | GSE62448_merged_normalized_counts.tab.gz-set-0 | anti-conservative | 0.00 | anti-conservative | 0.00 | Homo sapiens | 9606 | FALSE | ||
| GSE62448 | GSE62448_merged_normalized_counts.tab.gz-set-1 | anti-conservative | 0.00 | anti-conservative | 0.00 | Homo sapiens | 9606 | FALSE | ||
| GSE90013 | GSE90013_gene_exp.diff_A_B_Gene.txt.gz | anti-conservative | 0.02 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE75510 | GSE75510_diffExonExprZH3vsB6.txt.gz | anti-conservative | 0.91 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE69110 | GSE69110_d2GFP_vs_d2Sox9OE.deseq.res.csv.gz | anti-conservative | 0.58 | anti-conservative | 0.28 | Homo sapiens | 9606 | FALSE | ||
| GSE90712 | GSE90712_Thy1_positive_E_Cad_positive_vs_Thy1_positive_E_Cad_negative.DESeq2_Results.tsv.gz | anti-conservative | 0.60 | anti-conservative | 0.36 | Mus musculus | 10090 | FALSE | ||
| GSE90013 | GSE90013_isoform_exp.diff_A_B_Isoform.txt.gz | anti-conservative | 0.03 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE70876 | GSE70876_Additional_file_4.xls.gz | anti-conservative | 0.32 | NA | NA | NA | Dunaliella tertiolecta | 3047 | FALSE | |
| GSE95337 | GSE95337_DESeq_EH_Control.vs.dKO.res.txt.gz | anti-conservative | 0.56 | anti-conservative | 0.38 | Mus musculus | 10090 | FALSE | ||
| GSE79143 | GSE79143_SNPCountsTable.txt.gz | anti-conservative | 0.49 | NA | NA | NA | Ovis aries | 9940 | FALSE | |
| GSE90013 | GSE90013_tss_group_exp.diff_A_B_tss.txt.gz | anti-conservative | 0.03 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE52153 | GSE52153_czt-1DMSOvsczt-1STS.txt.gz | anti-conservative | 0.55 | NA | NA | NA | Neurospora crassa | 5141 | FALSE | |
| GSE40948 | GSE40948_NPC_vs_ESC_2replicates_result_10.transcript_summary.tsv.gz | anti-conservative | 0.48 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE40948 | GSE40948_NPC_vs_ESC_2replicates_result_10.transcript_summary.tsv.gz | anti-conservative | 0.48 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE82134 | GSE82134_NCBI_res_root_deseq_full.xlsx | anti-conservative | 0.61 | NA | NA | NA | Hordeum vulgare | 4513 | FALSE | |
| GSE78967 | GSE78967_Deseq_Analysis.xlsx | anti-conservative | 0.47 | anti-conservative | 0.38 | Schistosoma mansoni | 6183 | FALSE | ||
| GSE52153 | GSE52153_wtDMSOvswtSTS.txt.gz | anti-conservative | 0.71 | NA | NA | NA | Neurospora crassa | 5141 | FALSE | |
| GSE53265 | GSE53265_DESeq.PBNbVsLBNb-orig-FDR0.01.txt.gz | anti-conservative | 0.00 | anti-conservative | 0.00 | Drosophila melanogaster | 7227 | FALSE | ||
| GSE87448 | GSE87448_1944_common_genes_from_Venn_Diagram.txt.gz-set-0 | anti-conservative | 0.04 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87448 | GSE87448_1944_common_genes_from_Venn_Diagram.txt.gz-set-1 | anti-conservative | 0.02 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87448 | GSE87448_1944_common_genes_from_Venn_Diagram.txt.gz-set-2 | anti-conservative | 0.02 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87448 | GSE87448_1944_common_genes_from_Venn_Diagram.txt.gz-set-3 | anti-conservative | 0.03 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87448 | GSE87448_1944_common_genes_from_Venn_Diagram.txt.gz-set-4 | anti-conservative | 0.04 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87448 | GSE87448_1944_common_genes_from_Venn_Diagram.txt.gz-set-5 | anti-conservative | 0.02 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87448 | GSE87448_1944_common_genes_from_Venn_Diagram.txt.gz-set-6 | anti-conservative | 0.02 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87448 | GSE87448_1944_common_genes_from_Venn_Diagram.txt.gz-set-7 | anti-conservative | 0.03 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87448 | GSE87448_1944_common_genes_from_Venn_Diagram.txt.gz-set-8 | anti-conservative | 0.04 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87448 | GSE87448_1944_common_genes_from_Venn_Diagram.txt.gz-set-9 | anti-conservative | 0.02 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87448 | GSE87448_1944_common_genes_from_Venn_Diagram.txt.gz-set-10 | anti-conservative | 0.02 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87448 | GSE87448_1944_common_genes_from_Venn_Diagram.txt.gz-set-11 | anti-conservative | 0.03 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE66822 | GSE66822_PRMT5-vs-WT_SC-mrna_counts.txt.gz | anti-conservative | 0.83 | anti-conservative | 0.74 | Mus musculus | 10090 | FALSE | ||
| GSE53265 | GSE53265_DESeq.PBNbVsPBNbMed27IR-orig-FDR0.01.txt.gz | anti-conservative | 0.00 | anti-conservative | 0.00 | Drosophila melanogaster | 7227 | FALSE | ||
| GSE56439 | GSE56439_DiffExprAnalysis_1.5_fold_.xlsx.gz-sheet-ABA vs CK(>1.5 fold) | anti-conservative | 0.00 | NA | NA | NA | Arachis hypogaea | 3818 | FALSE | |
| GSE56439 | GSE56439_DiffExprAnalysis_1.5_fold_.xlsx.gz-sheet-water defici VS ABA (>1.5 fold) | anti-conservative | 0.00 | NA | NA | NA | Arachis hypogaea | 3818 | FALSE | |
| GSE39812 | GSE39812_FB_result_transcript_summary.tsv.txt.gz | anti-conservative | 0.65 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87448 | GSE87448_AKT_vs_CTRL_at_2fold-p005-4433_genes.txt.gz-set-0 | anti-conservative | 0.07 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87448 | GSE87448_AKT_vs_CTRL_at_2fold-p005-4433_genes.txt.gz-set-1 | anti-conservative | 0.03 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87448 | GSE87448_AKT_vs_CTRL_at_2fold-p005-4433_genes.txt.gz-set-2 | anti-conservative | 0.25 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87448 | GSE87448_AKT_vs_CTRL_at_2fold-p005-4433_genes.txt.gz-set-3 | anti-conservative | 0.23 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87448 | GSE87448_KRAS_vs_CTRL_at_2fold-p005-4238_genes.txt.gz-set-0 | anti-conservative | 0.08 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87448 | GSE87448_KRAS_vs_CTRL_at_2fold-p005-4238_genes.txt.gz-set-1 | anti-conservative | 0.15 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87448 | GSE87448_KRAS_vs_CTRL_at_2fold-p005-4238_genes.txt.gz-set-2 | anti-conservative | 0.03 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87448 | GSE87448_KRAS_vs_CTRL_at_2fold-p005-4238_genes.txt.gz-set-3 | anti-conservative | 0.22 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87448 | GSE87448_MYC_vs_CTRL_at_2fold-p005-3502_genes_Myc_Only.txt.gz-set-0 | anti-conservative | 0.07 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE87448 | GSE87448_MYC_vs_CTRL_at_2fold-p005-3502_genes_Myc_Only.txt.gz-set-1 | anti-conservative | 0.03 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE75878 | GSE75878_promoters.diff.gz | anti-conservative | 0.44 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE75833 | GSE75833_DESeq-processed_FB.control_vs_BR.txt.gz | anti-conservative | 0.60 | anti-conservative | 0.14 | Drosophila melanogaster | 7227 | FALSE | ||
| GSE60968 | GSE60968_VEC_vs_CRE_DE.txt.gz | anti-conservative | 0.38 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE50535 | GSE50535_diffexp_1.txt.gz-set-0 | anti-conservative | 0.63 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE50535 | GSE50535_diffexp_1.txt.gz-set-1 | anti-conservative | 0.64 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE93827 | GSE93827_LMP1_2a_vs_GFP.txt.gz | anti-conservative | 0.51 | anti-conservative | 0.27 | Mus musculus | 10090 | FALSE | ||
| GSE75878 | GSE75878_splicing.diff.gz | anti-conservative | 0.38 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE70488 | GSE70488_Day_vs_Night_sSeq.txt.gz | anti-conservative | 0.35 | NA | NA | NA | Acropora millepora | 45264 | FALSE | |
| GSE59715 | GSE59715_finalHiCRNAseqTable.csv.gz | anti-conservative | 0.73 | anti-conservative | 0.44 | Caenorhabditis elegans | 6239 | FALSE | ||
| GSE50535 | GSE50535_diffexp_2.txt.gz | anti-conservative | 0.56 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE83134 | GSE83134_RYBPfl.DESeq2.Output.txt.gz-set-0 | anti-conservative | 0.92 | anti-conservative | 0.99 | Mus musculus | 10090 | FALSE | ||
| GSE50535 | GSE50535_diffexp_3.txt.gz-set-0 | anti-conservative | 0.61 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE50535 | GSE50535_diffexp_3.txt.gz-set-1 | anti-conservative | 0.30 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE80348 | GSE80348_20160316_6h_wt_vs_mu.xlsx | anti-conservative | 0.52 | NA | NA | NA | Danio rerio | 7955 | FALSE | |
| GSE87398 | GSE87398_gene_exp.diff.gz | anti-conservative | 0.83 | NA | NA | NA | Acinetobacter baumannii ATCC 17978 | 400667 | FALSE | |
| GSE99096 | GSE99096_Yang_Processed_data_Oxidative_Stress.xlsx | anti-conservative | 0.31 | NA | NA | NA | Lactobacillus plantarum | 1590 | FALSE | |
| GSE70069 | GSE70069_Deregulated_genes_upon_knock-down_of_Setdb1_in_C2C12.txt.gz | anti-conservative | 0.00 | anti-conservative | 0.00 | Mus musculus | 10090 | FALSE | ||
| GSE52080 | GSE52080_processed_data_pvalue-filtered.txt.gz | anti-conservative | 0.00 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE85627 | GSE85627_mDUX-mESC.xlsx.gz-sheet-Unsorted | anti-conservative | 0.62 | anti-conservative | 0.16 | Mus musculus | 10090 | FALSE | ||
| GSE85627 | GSE85627_mDUX-mESC.xlsx.gz-sheet-Sorted | anti-conservative | 0.53 | anti-conservative | 0.18 | Mus musculus | 10090 | FALSE | ||
| GSE74171 | GSE74171_expressed_transcript_aging_RNAseq_posterior_midgut.txt.gz | anti-conservative | 0.51 | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE93877 | GSE93877_NB4_RNASeq_ATRA.txt.gz | anti-conservative | 0.84 | anti-conservative | 0.75 | Homo sapiens | 9606 | FALSE | ||
| GSE74171 | GSE74171_processed_aging_data.txt.gz | anti-conservative | 0.01 | anti-conservative | 0.00 | Drosophila melanogaster | 7227 | FALSE | ||
| GSE57482 | GSE57482_output_score.txt.gz | anti-conservative | 0.25 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE89238 | GSE89238_SET2_KO_DESeq2_output.txt.gz | anti-conservative | 0.63 | anti-conservative | 0.67 | Saccharomyces cerevisiae | 4932 | FALSE | ||
| GSE93877 | GSE93877_NB4_RNASeq_DMSO.txt.gz | anti-conservative | 0.95 | anti-conservative | 0.93 | Homo sapiens | 9606 | FALSE | ||
| GSE87398 | GSE87398_genes_group_exp.diff.gz | anti-conservative | 0.83 | NA | NA | NA | Acinetobacter baumannii ATCC 17978 | 400667 | FALSE | |
| GSE73323 | GSE73323_gene_expression_profiles.txt.gz | anti-conservative | 0.00 | NA | NA | NA | Pseudomonas aeruginosa | 287 | FALSE | |
| GSE65688 | GSE65688_gene_exp.diff_GFP_TAT_Gene.csv.gz | anti-conservative | 0.02 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE59571 | GSE59571_S13113_genesdiff.xlsx | anti-conservative | 0.70 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE96999 | GSE96999_DESeq2_miseq_output.txt.gz | anti-conservative | 0.25 | anti-conservative | 0.23 | Homo sapiens | 9606 | FALSE | ||
| GSE96999 | GSE96999_DESeq2_miseq_output.txt.gz | anti-conservative | 0.25 | anti-conservative | 0.23 | Homo sapiens | 9606 | FALSE | ||
| GSE94280 | GSE94280_DESeq2_results_Y_vs_O.txt.gz | anti-conservative | 0.61 | anti-conservative | 0.33 | Homo sapiens | 9606 | FALSE | ||
| GSE93313 | GSE93313_DESeq_2Dvs3D.txt.gz | anti-conservative | 0.77 | anti-conservative | 0.42 | Mus musculus | 10090 | FALSE | ||
| GSE74168 | GSE74168_expressed_transcripts_RNAseq_GLIrnai_posterior_midgut_EC.txt.gz | anti-conservative | 0.44 | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE68998 | GSE68998_DiffExpDeseq2_mdx2_NOut_3.6.14.csv.gz | anti-conservative | 0.59 | anti-conservative | 0.47 | Mus musculus | 10090 | FALSE | ||
| GSE96999 | GSE96999_DESeq2_nextseq_output.txt.gz | anti-conservative | 0.41 | anti-conservative | 0.09 | Homo sapiens | 9606 | FALSE | ||
| GSE96999 | GSE96999_DESeq2_nextseq_output.txt.gz | anti-conservative | 0.41 | anti-conservative | 0.09 | Homo sapiens | 9606 | FALSE | ||
| GSE93313 | GSE93313_DESeq_2DvsTranswell.txt.gz | anti-conservative | 0.67 | anti-conservative | 0.34 | Mus musculus | 10090 | FALSE | ||
| GSE86235 | GSE86235_KORvsKOS.xls.gz | anti-conservative | 0.00 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE36959 | GSE36959_gene_exp_diff.txt.gz | anti-conservative | 0.64 | NA | NA | NA | Nannochloropsis oceanica | 145522 | FALSE | |
| GSE93313 | GSE93313_DESeq_3DvsTranswell.txt.gz | anti-conservative | 0.79 | anti-conservative | 0.55 | Mus musculus | 10090 | FALSE | ||
| GSE86054 | GSE86054_gene_expression.txt.gz | anti-conservative | 0.95 | anti-conservative | 0.89 | Drosophila melanogaster | 7227 | FALSE | ||
| GSE84481 | GSE84481_3xTg.txt.gz | anti-conservative | 0.05 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE72491 | GSE72491_PCBP2_KO_v_WT_DESeq_gencode.all.name.txt.gz | anti-conservative | 0.72 | anti-conservative | 0.68 | Mus musculus | 10090 | FALSE | ||
| GSE49587 | GSE49587_ORvSmn_DEUtable.txt.gz | anti-conservative | 0.77 | NA | NA | NA | Drosophila melanogaster | 7227 | FALSE | |
| GSE93547 | GSE93547_LMvsWTM_cleaned_deseq2.csv.gz | anti-conservative | 0.51 | anti-conservative | 0.32 | Vibrio parahaemolyticus RIMD 2210633 | 223926 | FALSE | ||
| GSE85847 | GSE85847_matrix_rnaseq_GEO_submission_jsantos20160817.txt.gz | anti-conservative | 0.66 | anti-conservative | 0.57 | Arabidopsis thaliana | 3702 | FALSE | ||
| GSE60191 | GSE60191_RNA_halflives.xlsx.gz-sheet-Tabelle1 | anti-conservative | 0.32 | NA | NA | NA | Homo sapiens | 9606 | FALSE | |
| GSE84481 | GSE84481_Neuro2a.txt.gz-set-0 | anti-conservative | 0.04 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE84481 | GSE84481_Neuro2a.txt.gz-set-1 | anti-conservative | 0.04 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE51645 | GSE51645_ASE_processed_data.txt.gz | anti-conservative | 0.98 | NA | NA | NA | Saccharomyces cerevisiae | 4932 | FALSE | |
| GSE51645 | GSE51645_ASE_processed_data.txt.gz | anti-conservative | 0.98 | NA | NA | NA | Saccharomyces cerevisiae | 4932 | FALSE | |
| GSE17970 | GSE17970_supplemental_table_1.xls.gz | anti-conservative | 0.47 | NA | NA | NA | Chlamydomonas reinhardtii | 3055 | FALSE | |
| GSE17970 | GSE17970_supplemental_table_1.xls.gz | anti-conservative | 0.47 | NA | NA | NA | Chlamydomonas reinhardtii | 3055 | FALSE | |
| GSE50198 | GSE50198_Tet1kd_vs_v6.5_DESeq_results.txt.gz-set-0 | anti-conservative | 0.57 | anti-conservative | 0.35 | Mus musculus | 10090 | FALSE | ||
| GSE50198 | GSE50198_Tet1kd_vs_v6.5_DESeq_results.txt.gz-set-0 | anti-conservative | 0.57 | anti-conservative | 0.35 | Mus musculus | 10090 | FALSE | ||
| GSE50198 | GSE50198_Tet1kd_vs_v6.5_DESeq_results.txt.gz-set-1 | anti-conservative | 0.46 | anti-conservative | 0.17 | Mus musculus | 10090 | FALSE | ||
| GSE50198 | GSE50198_Tet1kd_vs_v6.5_DESeq_results.txt.gz-set-1 | anti-conservative | 0.46 | anti-conservative | 0.17 | Mus musculus | 10090 | FALSE | ||
| GSE50198 | GSE50198_Tet1kd_vs_v6.5_DEXSeq_results.txt.gz | anti-conservative | 0.67 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE50198 | GSE50198_Tet1kd_vs_v6.5_DEXSeq_results.txt.gz | anti-conservative | 0.67 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE50198 | GSE50198_Tet2kd_vs_v6.5_DESeq_results.txt.gz-set-1 | anti-conservative | 0.57 | anti-conservative | 0.31 | Mus musculus | 10090 | FALSE | ||
| GSE50198 | GSE50198_Tet2kd_vs_v6.5_DESeq_results.txt.gz-set-1 | anti-conservative | 0.57 | anti-conservative | 0.31 | Mus musculus | 10090 | FALSE | ||
| GSE50198 | GSE50198_Tet2kd_vs_v6.5_DEXSeq_results.txt.gz | anti-conservative | 0.68 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE50198 | GSE50198_Tet2kd_vs_v6.5_DEXSeq_results.txt.gz | anti-conservative | 0.68 | NA | NA | NA | Mus musculus | 10090 | FALSE | |
| GSE52058 | GSE52058_Cuffdiff_Dana_TestisOvary.gene_exp.diff.gz | anti-conservative | 0.35 | NA | NA | NA | Drosophila ananassae | 7217 | FALSE | |
| GSE52058 | GSE52058_Cuffdiff_Dana_TestisOvary.gene_exp.diff.gz | anti-conservative | 0.35 | NA | NA | NA | Drosophila pseudoobscura | 7237 | FALSE | |
| GSE52058 | GSE52058_Cuffdiff_Dana_TestisOvary.gene_exp.diff.gz | anti-conservative | 0.35 | NA | NA | NA | Drosophila yakuba | 7245 | FALSE | |
| GSE52058 | GSE52058_Cuffdiff_Dana_TestisOvary.gene_exp.diff.gz | anti-conservative | 0.35 | NA | NA | NA | Drosophila pseudoobscura | 7237 | FALSE | |
| GSE52058 | GSE52058_Cuffdiff_Dpse_TestisOvary.gene_exp.diff.gz | anti-conservative | 0.42 | NA | NA | NA | Drosophila ananassae | 7217 | FALSE | |
| GSE52058 | GSE52058_Cuffdiff_Dpse_TestisOvary.gene_exp.diff.gz | anti-conservative | 0.42 | NA | NA | NA | Drosophila pseudoobscura | 7237 | FALSE | |
| GSE52058 | GSE52058_Cuffdiff_Dpse_TestisOvary.gene_exp.diff.gz | anti-conservative | 0.42 | NA | NA | NA | Drosophila yakuba | 7245 | FALSE | |
| GSE52058 | GSE52058_Cuffdiff_Dpse_TestisOvary.gene_exp.diff.gz | anti-conservative | 0.42 | NA | NA | NA | Drosophila pseudoobscura | 7237 | FALSE | |
| GSE55528 | GSE55528_gene_exp_PA.diff.gz | anti-conservative | 0.56 | NA | NA | NA | Pseudomonas aeruginosa MPAO1/P1 | 1131757 | FALSE | |
| GSE55528 | GSE55528_gene_exp_PA.diff.gz | anti-conservative | 0.56 | NA | NA | NA | Staphylococcus aureus subsp. aureus str. Newman | 426430 | FALSE | |
| GSE55528 | GSE55528_gene_exp_SA.diff.gz | anti-conservative | 0.68 | NA | NA | NA | Pseudomonas aeruginosa MPAO1/P1 | 1131757 | FALSE | |
| GSE55528 | GSE55528_gene_exp_SA.diff.gz | anti-conservative | 0.68 | NA | NA | NA | Staphylococcus aureus subsp. aureus str. Newman | 426430 | FALSE | |
| GSE56132 | GSE56132_Pm_Si_expression.txt.gz-set-0 | anti-conservative | 0.67 | NA | NA | NA | Thalassiosira pseudonana | 35128 | FALSE | |
| GSE56132 | GSE56132_Pm_Si_expression.txt.gz-set-0 | anti-conservative | 0.67 | NA | NA | NA | Fragilariopsis cylindrus | 186039 | FALSE | |
| GSE56132 | GSE56132_Pm_Si_expression.txt.gz-set-0 | anti-conservative | 0.67 | NA | NA | NA | Pseudo-nitzschia multiseries | 37319 | FALSE | |
| GSE56132 | GSE56132_Pm_Si_expression.txt.gz-set-1 | anti-conservative | 0.57 | NA | NA | NA | Thalassiosira pseudonana | 35128 | FALSE | |
| GSE56132 | GSE56132_Pm_Si_expression.txt.gz-set-1 | anti-conservative | 0.57 | NA | NA | NA | Fragilariopsis cylindrus | 186039 | FALSE | |
| GSE56132 | GSE56132_Pm_Si_expression.txt.gz-set-1 | anti-conservative | 0.57 | NA | NA | NA | Pseudo-nitzschia multiseries | 37319 | FALSE | |
| GSE58052 | GSE58052_N.europaea_co-culture_over_single-culture.txt.gz | anti-conservative | 0.61 | NA | NA | NA | Nitrosomonas europaea | 915 | FALSE | |
| GSE58052 | GSE58052_N.europaea_co-culture_over_single-culture.txt.gz | anti-conservative | 0.61 | NA | NA | NA | Nitrobacter winogradskyi | 913 | FALSE | |
| GSE58052 | GSE58052_N.europaea_co-culture_over_single-culture.txt.gz | anti-conservative | 0.61 | NA | NA | NA | Nitrobacter winogradskyi | 913 | TRUE | |
| GSE58865 | GSE58865_Hyphae_vs_Oidia_DESeq_results.txt.gz | anti-conservative | 0.46 | anti-conservative | 0.03 | Coprinopsis cinerea | 5346 | FALSE | ||
| GSE58865 | GSE58865_Hyphae_vs_Oidia_DESeq_results.txt.gz | anti-conservative | 0.46 | anti-conservative | 0.03 | Coprinopsis cinerea | 5346 | FALSE | ||
| GSE68176 | GSE68176_Ophio1_1.gene_exp.diff.gz | anti-conservative | 0.56 | NA | NA | NA | Camponotus castaneus | 105051 | TRUE | |
| GSE68176 | GSE68176_Ophio1_1.gene_exp.diff.gz | anti-conservative | 0.56 | NA | NA | NA | Camponotus castaneus | 105051 | FALSE | |
| GSE68176 | GSE68176_Ophio1_1.gene_exp.diff.gz | anti-conservative | 0.56 | NA | NA | NA | Ophiocordyceps unilateralis | 268505 | FALSE |
| Accession | suppdata_id | Histogram | Type | SRP | pi0 | fp | rs | ud | Histogram after filter | Type after filter | SRP after filter | pi0 after filter | fp after filter | rs after filter | ud after filter |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GSE32038 | GSE32038_cds.diff.gz | anti-conservative | 0.95 | 0.07 | 528 | 9578 | 485 | NA | NA | NA | NA | NA | NA | NA | |
| GSE32038 | GSE32038_promoters.diff.gz | anti-conservative | 0.95 | 0.05 | 683 | 12342 | 669 | NA | NA | NA | NA | NA | NA | NA | |
| GSE32038 | GSE32038_splicing.diff.gz | anti-conservative | 0.96 | 0.06 | 824 | 14978 | 708 | NA | NA | NA | NA | NA | NA | NA | |
| GSE33141 | GSE33141_BWADETsKOvsWT2.xls.gz-sheet-DETs-FC1.5-pval0.05 | anti-conservative | 0.96 | 0.01 | 71 | 1291 | 63 | NA | NA | NA | NA | NA | NA | NA | |
| GSE33141 | GSE33141_TopHatDETsKOvsWT.xls.gz | anti-conservative | 0.96 | 0.01 | 163 | 2975 | 125 | NA | NA | NA | NA | NA | NA | NA | |
| GSE33736 | GSE33736_HAmCqG0_G8expression.txt.gz | anti-conservative | 0.84 | 0.60 | 339 | 5415 | 1209 | NA | NA | NA | NA | NA | NA | NA | |
| GSE36781 | GSE36781_gene_exp_diff.txt.gz | anti-conservative | NA | 0.96 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE36959 | GSE36959_gene_exp_diff.txt.gz | anti-conservative | 0.78 | 0.64 | 177 | 2630 | 936 | NA | NA | NA | NA | NA | NA | NA | |
| GSE37001 | GSE37001_DEgenes.txt.gz | anti-conservative | 0.95 | 0.00 | 99 | 1788 | 95 | anti-conservative | 0.95 | 0.00 | 52 | 938 | 52 | ||
| GSE37001 | GSE37001_DEintrons.txt.gz | anti-conservative | 0.95 | 0.00 | 134 | 2412 | 133 | anti-conservative | 0.95 | 0.00 | 102 | 1842 | 102 | ||
| GSE37001 | GSE37001_DEisoforms.txt.gz | anti-conservative | 0.95 | 0.00 | 363 | 6562 | 342 | NA | NA | NA | NA | NA | NA | NA | |
| GSE38764 | GSE38764_DESeq.nbVsneuron-orig-FDR0.01.txt.gz | anti-conservative | 0.95 | 0.00 | 177 | 3190 | 174 | anti-conservative | 0.95 | 0.00 | 86 | 1561 | 86 | ||
| GSE41367 | GSE41367_brenneri_gns.expr.txt.gz | anti-conservative | 0.58 | 0.36 | 412 | 4561 | 5599 | NA | NA | NA | NA | NA | NA | NA | |
| GSE41367 | GSE41367_brenneri_soap.expr.txt.gz | anti-conservative | 0.60 | 0.37 | 1530 | 17465 | 19329 | NA | NA | NA | NA | NA | NA | NA | |
| GSE41367 | GSE41367_briggsae_gns.expr.txt.gz | anti-conservative | 0.79 | 0.33 | 546 | 8219 | 2733 | NA | NA | NA | NA | NA | NA | NA | |
| GSE41367 | GSE41367_briggsae_soap.expr.txt.gz | anti-conservative | 0.79 | 0.35 | 608 | 9078 | 3142 | NA | NA | NA | NA | NA | NA | NA | |
| GSE41367 | GSE41367_elegans_gns.expr.txt.gz | anti-conservative | 0.73 | 0.30 | 513 | 7107 | 3612 | NA | NA | NA | NA | NA | NA | NA | |
| GSE41367 | GSE41367_elegans_soap.expr.txt.gz | anti-conservative | 0.72 | 0.26 | 677 | 9227 | 5078 | NA | NA | NA | NA | NA | NA | NA | |
| GSE41367 | GSE41367_japonica_gns.expr.txt.gz | anti-conservative | 0.76 | 0.29 | 556 | 8045 | 3323 | NA | NA | NA | NA | NA | NA | NA | |
| GSE41367 | GSE41367_japonica_soap.expr.txt.gz | anti-conservative | 0.70 | 0.29 | 1921 | 25699 | 15337 | NA | NA | NA | NA | NA | NA | NA | |
| GSE41367 | GSE41367_remanei_gns.expr.txt.gz | anti-conservative | 0.75 | 0.27 | 685 | 9745 | 4381 | NA | NA | NA | NA | NA | NA | NA | |
| GSE41367 | GSE41367_remanei_soap.expr.txt.gz | anti-conservative | 0.73 | 0.25 | 1452 | 20220 | 10043 | NA | NA | NA | NA | NA | NA | NA | |
| GSE41590 | GSE41590_Gene_expression.txt.gz | anti-conservative | 0.96 | 0.01 | 90 | 1631 | 74 | anti-conservative | 0.96 | 0.01 | 62 | 1121 | 52 | ||
| GSE41766 | GSE41766_IBH1-Ox_vs_Col.txt.gz | anti-conservative | 0.95 | 0.00 | 77 | 1398 | 75 | anti-conservative | 0.95 | 0.00 | 51 | 919 | 50 | ||
| GSE41873 | GSE41873_FPKM_all_genes_from_CuffDiff.txt.gz | anti-conservative | 0.80 | 0.74 | 59 | 899 | 278 | NA | NA | NA | NA | NA | NA | NA | |
| GSE43189 | GSE43189_processed_h99_rim101.csv.gz | anti-conservative | 0.84 | 0.46 | 218 | 3472 | 800 | NA | NA | NA | NA | NA | NA | NA | |
| GSE43650 | GSE43650_gene_exp_diff_sig.txt.gz | anti-conservative | 0.95 | 0.00 | 119 | 2153 | 114 | NA | NA | NA | NA | NA | NA | NA | |
| GSE44457 | GSE44457_Human_transcriptome_deg.txt.gz | anti-conservative | 0.95 | 0.00 | 524 | 9463 | 523 | NA | NA | NA | NA | NA | NA | NA | |
| GSE45788 | GSE45788_S72_2_RefII_S72_1_Emf_exp.cuff.gz | anti-conservative | 0.82 | 0.83 | 16 | 253 | 68 | NA | NA | NA | NA | NA | NA | NA | |
| GSE48166 | GSE48166_Cufflinks_FPKM.txt.gz | anti-conservative | NA | 0.95 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE48671 | GSE48671_all.GeneDiffExp.txt.gz-set-0 | anti-conservative | 0.90 | 0.27 | 529 | 9072 | 1078 | NA | NA | NA | NA | NA | NA | NA | |
| GSE48671 | GSE48671_all.GeneDiffExp.txt.gz-set-1 | anti-conservative | 0.92 | 0.16 | 624 | 10909 | 1027 | NA | NA | NA | NA | NA | NA | NA | |
| GSE48812 | GSE48812_24h_LNCAP_SFN.diff.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 136 | 2456 | 130 | NA | NA | NA | NA | NA | NA | NA | |
| GSE48812 | GSE48812_24h_LNCAPvsPC3.diff.txt.gz-set-0 | anti-conservative | 0.94 | 0.00 | 480 | 8593 | 570 | NA | NA | NA | NA | NA | NA | NA | |
| GSE48812 | GSE48812_24h_PC3_SFN.diff.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 191 | 3449 | 181 | NA | NA | NA | NA | NA | NA | NA | |
| GSE48812 | GSE48812_24h_PREC_SFN.diff.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 173 | 3134 | 164 | NA | NA | NA | NA | NA | NA | NA | |
| GSE48812 | GSE48812_24h_PRECvsLNCAP.diff.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 494 | 8880 | 545 | NA | NA | NA | NA | NA | NA | NA | |
| GSE48812 | GSE48812_24h_PRECvsPC3.diff.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 453 | 8143 | 490 | NA | NA | NA | NA | NA | NA | NA | |
| GSE48812 | GSE48812_6h_LNCAP_SFN.diff.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 147 | 2662 | 140 | NA | NA | NA | NA | NA | NA | NA | |
| GSE48812 | GSE48812_6h_LNCAPvsPC3.diff.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 486 | 8743 | 526 | NA | NA | NA | NA | NA | NA | NA | |
| GSE48812 | GSE48812_6h_PC3_SFN.diff.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 157 | 2848 | 150 | NA | NA | NA | NA | NA | NA | NA | |
| GSE48812 | GSE48812_6h_PREC_SFN.diff.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 171 | 3096 | 161 | NA | NA | NA | NA | NA | NA | NA | |
| GSE48812 | GSE48812_6h_PRECvsLNCAP.diff.txt.gz-set-0 | anti-conservative | 0.94 | 0.00 | 430 | 7698 | 500 | NA | NA | NA | NA | NA | NA | NA | |
| GSE48812 | GSE48812_6h_PRECvsPC3.diff.txt.gz-set-0 | anti-conservative | 0.94 | 0.00 | 373 | 6675 | 437 | NA | NA | NA | NA | NA | NA | NA | |
| GSE50535 | GSE50535_diffexp_1.txt.gz-set-0 | anti-conservative | 0.99 | 0.63 | 460 | 8686 | 51 | NA | NA | NA | NA | NA | NA | NA | |
| GSE50535 | GSE50535_diffexp_1.txt.gz-set-1 | anti-conservative | 0.97 | 0.64 | 434 | 7967 | 290 | NA | NA | NA | NA | NA | NA | NA | |
| GSE50535 | GSE50535_diffexp_2.txt.gz | anti-conservative | 0.82 | 0.56 | 573 | 8880 | 2472 | NA | NA | NA | NA | NA | NA | NA | |
| GSE50535 | GSE50535_diffexp_3.txt.gz-set-0 | anti-conservative | 0.88 | 0.61 | 562 | 9412 | 1447 | NA | NA | NA | NA | NA | NA | NA | |
| GSE50535 | GSE50535_diffexp_3.txt.gz-set-1 | anti-conservative | 0.87 | 0.30 | 997 | 16488 | 2831 | NA | NA | NA | NA | NA | NA | NA | |
| GSE50708 | GSE50708_DE_result.txt.gz | anti-conservative | 0.87 | 0.32 | 411 | 6756 | 1207 | NA | NA | NA | NA | NA | NA | NA | |
| GSE51037 | GSE51037_Untreated_Nitrate_Processed_CunninghamBussel.xlsx.gz | anti-conservative | NA | 0.90 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE51645 | GSE51645_DE_processed_data.txt.gz | anti-conservative | 0.83 | 0.76 | 60 | 951 | 240 | NA | NA | NA | NA | NA | NA | NA | |
| GSE51645 | GSE51645_ASE_processed_data.txt.gz | anti-conservative | NA | 0.98 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE52058 | GSE52058_Cuffdiff_Dana_TestisOvary.gene_exp.diff.gz | anti-conservative | 0.96 | 0.35 | 521 | 9504 | 420 | NA | NA | NA | NA | NA | NA | NA | |
| GSE52058 | GSE52058_Cuffdiff_Dpse_TestisOvary.gene_exp.diff.gz | anti-conservative | 0.94 | 0.42 | 471 | 8400 | 577 | NA | NA | NA | NA | NA | NA | NA | |
| GSE52080 | GSE52080_processed_data_pvalue-filtered.txt.gz | anti-conservative | 0.95 | 0.00 | 67 | 1216 | 62 | NA | NA | NA | NA | NA | NA | NA | |
| GSE52153 | GSE52153_czt-1DMSOvsczt-1STS.txt.gz | anti-conservative | 0.92 | 0.55 | 213 | 3726 | 339 | NA | NA | NA | NA | NA | NA | NA | |
| GSE52153 | GSE52153_wtDMSOvswtSTS.txt.gz | anti-conservative | 0.95 | 0.71 | 139 | 2512 | 135 | NA | NA | NA | NA | NA | NA | NA | |
| GSE53040 | GSE53040_wtDMSOvswtXP13.txt.gz | anti-conservative | 0.86 | 0.69 | 135 | 2208 | 407 | NA | NA | NA | NA | NA | NA | NA | |
| GSE53265 | GSE53265_DESeq.PBNbVsLBNb-orig-FDR0.01.txt.gz | anti-conservative | 0.95 | 0.00 | 98 | 1768 | 97 | anti-conservative | 0.95 | 0.00 | 64 | 1162 | 64 | ||
| GSE53265 | GSE53265_DESeq.PBNbVsPBNbMed27IR-orig-FDR0.01.txt.gz | anti-conservative | 0.95 | 0.00 | 80 | 1442 | 79 | anti-conservative | 0.95 | 0.00 | 52 | 943 | 52 | ||
| GSE54440 | GSE54440_WT_Z2_RNAseq_rep2.txt.gz | anti-conservative | 0.76 | 0.51 | 194 | 2790 | 1178 | NA | NA | NA | NA | NA | NA | NA | |
| GSE54846 | GSE54846_130529.DESeq.120813.combined-htseq-Luc123-m1_123.HGNC.protein_coding.rsgt20.txt.gz | anti-conservative | 0.98 | 0.79 | 124 | 2310 | 49 | anti-conservative | 0.80 | 0.45 | 51 | 770 | 245 | ||
| GSE55528 | GSE55528_gene_exp_PA.diff.gz | anti-conservative | 0.86 | 0.56 | 112 | 1825 | 346 | NA | NA | NA | NA | NA | NA | NA | |
| GSE55528 | GSE55528_gene_exp_SA.diff.gz | anti-conservative | 0.83 | 0.68 | 37 | 584 | 141 | NA | NA | NA | NA | NA | NA | NA | |
| GSE56132 | GSE56132_Pm_Si_expression.txt.gz-set-0 | anti-conservative | 0.95 | 0.67 | 278 | 5010 | 296 | NA | NA | NA | NA | NA | NA | NA | |
| GSE56132 | GSE56132_Pm_Si_expression.txt.gz-set-1 | anti-conservative | 0.94 | 0.57 | 358 | 6353 | 470 | NA | NA | NA | NA | NA | NA | NA | |
| GSE56169 | GSE56169_normalized_RNASeq_Ctrl_vs_E2a.txt.gz | anti-conservative | 0.95 | 0.37 | 270 | 4859 | 296 | NA | NA | NA | NA | NA | NA | NA | |
| GSE56253 | GSE56253_GeneSpring_NGS_processed_data.txt.gz | anti-conservative | 0.95 | 0.00 | 531 | 9614 | 506 | NA | NA | NA | NA | NA | NA | NA | |
| GSE56439 | GSE56439_DiffExprAnalysis_1.5_fold_.xlsx.gz-sheet-ABA vs CK(>1.5 fold) | anti-conservative | 0.95 | 0.00 | 133 | 2405 | 133 | NA | NA | NA | NA | NA | NA | NA | |
| GSE56439 | GSE56439_DiffExprAnalysis_1.5_fold_.xlsx.gz-sheet-water defici VS ABA (>1.5 fold) | anti-conservative | 0.95 | 0.00 | 262 | 4722 | 260 | NA | NA | NA | NA | NA | NA | NA | |
| GSE57217 | GSE57217_bck1wt_geneexp_diff.txt.gz | anti-conservative | 0.77 | 0.73 | 82 | 1191 | 467 | NA | NA | NA | NA | NA | NA | NA | |
| GSE57217 | GSE57217_mkk2wt_geneexp_diff.txt.gz | anti-conservative | 0.90 | 0.80 | 69 | 1183 | 144 | NA | NA | NA | NA | NA | NA | NA | |
| GSE57217 | GSE57217_mpk1wt_geneexp_diff.txt.gz | anti-conservative | 0.80 | 0.77 | 72 | 1095 | 331 | NA | NA | NA | NA | NA | NA | NA | |
| GSE57254 | GSE57254_WT_KD_CELF1_Fold_change.txt.gz | anti-conservative | 0.95 | 0.00 | 64 | 1161 | 61 | NA | NA | NA | NA | NA | NA | NA | |
| GSE57580 | GSE57580_different_expressed_gene_list_between_gynoecious_vs_monoecious.txt.gz | anti-conservative | 0.95 | 0.00 | 53 | 955 | 53 | NA | NA | NA | NA | NA | NA | NA | |
| GSE59335 | GSE59335_exons_sig_anno_total.txt.gz | anti-conservative | 0.95 | 0.00 | 304 | 5497 | 298 | NA | NA | NA | NA | NA | NA | NA | |
| GSE59571 | GSE59571_S13113_genesdiff.xlsx | anti-conservative | 0.90 | 0.70 | 381 | 6505 | 808 | NA | NA | NA | NA | NA | NA | NA | |
| GSE60968 | GSE60968_VEC_vs_CRE_DE.txt.gz | anti-conservative | 0.86 | 0.38 | 370 | 6019 | 1174 | NA | NA | NA | NA | NA | NA | NA | |
| GSE61491 | GSE61491_CHDKD_differential_expression.txt.gz | anti-conservative | NA | 0.95 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE62200 | GSE62200_Table_S4.xls.gz-sheet-Table S5 N2Y6-M VS LYP9-M | anti-conservative | NA | 0.81 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE62448 | GSE62448_merged_normalized_counts.tab.gz-set-0 | anti-conservative | 0.95 | 0.00 | 157 | 2829 | 157 | anti-conservative | 0.95 | 0.00 | 62 | 1110 | 61 | ||
| GSE62448 | GSE62448_merged_normalized_counts.tab.gz-set-1 | anti-conservative | 0.95 | 0.00 | 157 | 2829 | 157 | anti-conservative | 0.95 | 0.00 | 62 | 1110 | 61 | ||
| GSE62785 | GSE62785_Table_S1_Genes_differentially_expressed_in_hns_mutant_in_mid-exponential_phase.xls.gz-sheet-status = OK | anti-conservative | NA | 0.86 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE62785 | GSE62785_Table_S2_Genes_differentially_expressed_in_hns_mutant_in_early_stationary_phase.xls.gz-sheet-status = ok | anti-conservative | NA | 0.78 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE63141 | GSE63141_eTMglc_gene_exp.diff.gz | anti-conservative | NA | 0.95 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE63141 | GSE63141_eTMgly_gene_exp.diff.gz | anti-conservative | NA | 0.78 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE63948 | GSE63948_Supplemental_Table2_DeepSeq_Fanourgakis_etAl.xls.gz-sheet-short 3’UTR transcripts(<350nt) | anti-conservative | NA | 0.90 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE63948 | GSE63948_Supplemental_Table2_DeepSeq_Fanourgakis_etAl.xls.gz-sheet-medium 3’UTR transcripts | anti-conservative | NA | 0.95 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE63948 | GSE63948_Supplemental_Table2_DeepSeq_Fanourgakis_etAl.xls.gz-sheet-long 3’UTR transcripts(>1500nt) | anti-conservative | NA | 0.87 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE64242 | GSE64242_cufdiff_isoform_exp.diff.gz | anti-conservative | NA | 0.93 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE64359 | GSE64359_DE_dfwt_combined.txt.gz | anti-conservative | 0.95 | 0.00 | 67 | 1217 | 65 | NA | NA | NA | NA | NA | NA | NA | |
| GSE64413 | GSE64413_orf57_pval_cutoff_0.001.csv.gz | anti-conservative | 0.95 | 0.00 | 122 | 2211 | 121 | NA | NA | NA | NA | NA | NA | NA | |
| GSE64413 | GSE64413_orf57_pval_cutoff_0.05.csv.gz | anti-conservative | 0.99 | 0.04 | 364 | 6818 | 95 | NA | NA | NA | NA | NA | NA | NA | |
| GSE64513 | GSE64513_FOXD3_vs_Control_gene_exp_diff_anno.txt.gz | anti-conservative | 0.81 | 0.61 | 205 | 3153 | 926 | NA | NA | NA | NA | NA | NA | NA | |
| GSE64513 | GSE64513_FOXD3_vs_Control_gene_exp_diff_sig_anno.txt.gz | anti-conservative | 0.95 | 0.00 | 53 | 956 | 53 | NA | NA | NA | NA | NA | NA | NA | |
| GSE65688 | GSE65688_gene_exp.diff_GFP_TAT_Gene.csv.gz | anti-conservative | 0.97 | 0.02 | 169 | 3132 | 90 | NA | NA | NA | NA | NA | NA | NA | |
| GSE66506 | GSE66506_DE_analysis_010714.xlsx-sheet-SigGenes | anti-conservative | 0.95 | 0.00 | 71 | 1280 | 70 | NA | NA | NA | NA | NA | NA | NA | |
| GSE67334 | GSE67334_TFH.Vs.TH1.DESeq_Analysis_DE_Genes.txt.gz | anti-conservative | NA | 0.79 | NA | NA | NA | anti-conservative | 0.77 | 0.56 | 46 | 672 | 256 | ||
| GSE67646 | GSE67646_DESeq_1.10.1.txt.gz | anti-conservative | NA | 0.67 | NA | NA | NA | anti-conservative | 0.89 | 0.25 | 71 | 1204 | 171 | ||
| GSE67674 | GSE67674_RNA-seq_analysis_PBSDMSOvsPBSGSK-J4.txt.gz | anti-conservative | NA | 0.95 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE67756 | GSE67756_LA2A-vs-LC2A.compare.txt.gz | anti-conservative | 0.82 | 0.42 | 1383 | 21576 | 5729 | NA | NA | NA | NA | NA | NA | NA | |
| GSE67756 | GSE67756_LA2A-vs-LC2A.diff_annot.txt.gz | anti-conservative | 0.95 | 0.00 | 531 | 9588 | 531 | NA | NA | NA | NA | NA | NA | NA | |
| GSE67756 | GSE67756_LB2A-vs-LA2A.compare.txt.gz | anti-conservative | 0.81 | 0.44 | 1339 | 20599 | 5993 | NA | NA | NA | NA | NA | NA | NA | |
| GSE67756 | GSE67756_LB2A-vs-LA2A.diff_annot.txt.gz | anti-conservative | 0.95 | 0.00 | 474 | 8553 | 473 | NA | NA | NA | NA | NA | NA | NA | |
| GSE67756 | GSE67756_LB2A-vs-LC2A.compare.txt.gz | anti-conservative | 0.79 | 0.53 | 1076 | 16058 | 5579 | NA | NA | NA | NA | NA | NA | NA | |
| GSE67756 | GSE67756_LB2A-vs-LC2A.diff_annot.txt.gz | anti-conservative | 0.95 | 0.00 | 268 | 4829 | 267 | NA | NA | NA | NA | NA | NA | NA | |
| GSE67756 | GSE67756_LB2A-vs-LF1A.compare.txt.gz | anti-conservative | 0.80 | 0.49 | 1206 | 18410 | 5618 | NA | NA | NA | NA | NA | NA | NA | |
| GSE67756 | GSE67756_LB2A-vs-LF1A.diff_annot.txt.gz | anti-conservative | 0.95 | 0.00 | 381 | 6880 | 381 | NA | NA | NA | NA | NA | NA | NA | |
| GSE67834 | GSE67834_DESeq2_genes_diffexp_by_fc_mTECs_vs_sp-DCs.csv.gz | anti-conservative | 0.89 | 0.29 | 863 | 14658 | 1950 | anti-conservative | 0.92 | 0.13 | 88 | 1527 | 153 | ||
| GSE67834 | GSE67834_DESeq2_genes_diffexp_by_fc_mTECs_vs_t-DCs.csv.gz | anti-conservative | 0.89 | 0.27 | 847 | 14329 | 1987 | anti-conservative | 0.93 | 0.11 | 91 | 1606 | 140 | ||
| GSE67834 | GSE67834_DESeq2_genes_diffexp_by_fc_sp-DCs_vs_mTECs.csv.gz | anti-conservative | 0.89 | 0.29 | 863 | 14658 | 1950 | anti-conservative | 0.92 | 0.13 | 88 | 1527 | 153 | ||
| GSE67834 | GSE67834_DESeq2_genes_diffexp_by_fc_sp-DCs_vs_t-DCs.csv.gz | anti-conservative | 0.97 | 0.52 | 560 | 10294 | 367 | anti-conservative | 0.90 | 0.22 | 77 | 1316 | 165 | ||
| GSE67834 | GSE67834_DESeq2_genes_diffexp_by_fc_t-DCs_vs_mTECs.csv.gz | anti-conservative | 0.89 | 0.27 | 847 | 14329 | 1987 | anti-conservative | 0.93 | 0.11 | 91 | 1606 | 140 | ||
| GSE67834 | GSE67834_DESeq2_genes_diffexp_by_fc_t-DCs_vs_sp-DCs.csv.gz | anti-conservative | 0.97 | 0.52 | 560 | 10294 | 367 | anti-conservative | 0.90 | 0.22 | 77 | 1316 | 165 | ||
| GSE68176 | GSE68176_Ophio1_1.gene_exp.diff.gz | anti-conservative | 0.93 | 0.56 | 503 | 8889 | 728 | NA | NA | NA | NA | NA | NA | NA | |
| GSE68846 | GSE68846_KO_vs_Control_05.csv.gz | anti-conservative | 0.95 | 0.00 | 66 | 1194 | 65 | NA | NA | NA | NA | NA | NA | NA | |
| GSE68846 | GSE68846_KO_vs_Control_10.csv.gz | anti-conservative | 0.95 | 0.00 | 81 | 1463 | 76 | NA | NA | NA | NA | NA | NA | NA | |
| GSE68846 | GSE68846_KO_vs_Control_15.csv.gz | anti-conservative | 0.96 | 0.01 | 94 | 1716 | 82 | NA | NA | NA | NA | NA | NA | NA | |
| GSE68846 | GSE68846_KO_vs_Control_20.csv.gz | anti-conservative | 0.96 | 0.01 | 106 | 1930 | 85 | anti-conservative | 0.96 | 0.01 | 51 | 933 | 41 | ||
| GSE69001 | GSE69001_DE_list_planktonic_v_biolfim.txt.gz | anti-conservative | 0.86 | 0.44 | 93 | 1510 | 289 | NA | NA | NA | NA | NA | NA | NA | |
| GSE69001 | GSE69001_DE_list_planktonic_v_plate.txt.gz | anti-conservative | 0.88 | 0.33 | 112 | 1882 | 286 | NA | NA | NA | NA | NA | NA | NA | |
| GSE69001 | GSE69001_DE_list_plate_v_biofilm.txt.gz | anti-conservative | 0.87 | 0.38 | 103 | 1700 | 299 | NA | NA | NA | NA | NA | NA | NA | |
| GSE70069 | GSE70069_Deregulated_genes_upon_knock-down_of_Setdb1_in_C2C12.txt.gz | anti-conservative | 0.95 | 0.00 | 570 | 10281 | 569 | anti-conservative | 0.95 | 0.00 | 103 | 1864 | 103 | ||
| GSE70290 | GSE70290_PV_Transcripts.txt.gz | anti-conservative | 0.96 | 0.01 | 225 | 4108 | 175 | NA | NA | NA | NA | NA | NA | NA | |
| GSE70488 | GSE70488_Day_vs_Night_sSeq.txt.gz | anti-conservative | 0.48 | 0.35 | 400 | 3632 | 8299 | NA | NA | NA | NA | NA | NA | NA | |
| GSE70876 | GSE70876_Additional_file_4.xls.gz | anti-conservative | 0.41 | 0.32 | 23 | 181 | 628 | NA | NA | NA | NA | NA | NA | NA | |
| GSE71093 | GSE71093_a456_vs_a123_sig.txt.gz | anti-conservative | 0.97 | 0.02 | 62 | 1139 | 42 | NA | NA | NA | NA | NA | NA | NA | |
| GSE71185 | GSE71185_NSD3_Knockdown_RNASeq_Cuffdiff_NSR.txt.gz | anti-conservative | 0.85 | 0.90 | 44 | 707 | 142 | NA | NA | NA | NA | NA | NA | NA | |
| GSE71185 | GSE71185_NSD3_Knockdown_RNASeq_Cuffdiff_PolyA.txt.gz | anti-conservative | 0.85 | 0.77 | 78 | 1260 | 266 | NA | NA | NA | NA | NA | NA | NA | |
| GSE71539 | GSE71539_TP0vsTP23_gene_results.txt.gz | anti-conservative | 0.81 | 0.86 | 67 | 1036 | 292 | NA | NA | NA | NA | NA | NA | NA | |
| GSE71539 | GSE71539_TP0vsTP23_tag_results.txt.gz | anti-conservative | 0.82 | 0.85 | 205 | 3177 | 873 | NA | NA | NA | NA | NA | NA | NA | |
| GSE71710 | GSE71710_siDGCR8_v_siSCR_DESeq_gencode.all.symbol.txt.gz | anti-conservative | 0.77 | 0.84 | 85 | 1244 | 469 | anti-conservative | 0.58 | 0.79 | 16 | 175 | 220 | ||
| GSE71902 | GSE71902_WILD-vs-CPH2.txt.gz | anti-conservative | 0.65 | 0.83 | 36 | 451 | 369 | NA | NA | NA | NA | NA | NA | NA | |
| GSE71916 | GSE71916_Expression_Cufflinks_siRbfox1_3+EGFP_compared_to_siNT+EGFP.txt.gz | anti-conservative | NA | 0.96 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE72293 | GSE72293_E17_vs_P9_filtered_rpkm5.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 98 | 1777 | 93 | NA | NA | NA | NA | NA | NA | NA | |
| GSE72293 | GSE72293_E17_vs_P9_filtered_rpkm5.txt.gz-set-1 | anti-conservative | 0.95 | 0.00 | 98 | 1779 | 95 | NA | NA | NA | NA | NA | NA | NA | |
| GSE72491 | GSE72491_PCBP2_KO_v_WT_DESeq_gencode.all.name.txt.gz | anti-conservative | 0.78 | 0.72 | 177 | 2629 | 925 | anti-conservative | 0.76 | 0.68 | 25 | 369 | 149 | ||
| GSE73323 | GSE73323_gene_expression_profiles.txt.gz | anti-conservative | 0.95 | 0.00 | 163 | 2948 | 148 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73376 | GSE73376_full_list_edgeR_annotated_DGCR8.txt.gz | anti-conservative | 0.83 | 0.80 | 182 | 2865 | 702 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73376 | GSE73376_full_list_edgeR_annotated_RRP6.txt.gz | anti-conservative | 0.78 | 0.82 | 155 | 2292 | 829 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_C6661_IgG.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 536 | 9666 | 535 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_C6661_IgG.txt.gz-set-1 | anti-conservative | 0.95 | 0.00 | 536 | 9666 | 535 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_LCL_EBNA1.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 694 | 12525 | 694 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_LCL_EBNA1.txt.gz-set-1 | anti-conservative | 0.95 | 0.00 | 694 | 12525 | 693 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_MUTU_EBNA1.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 683 | 12325 | 682 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_MUTU_EBNA1.txt.gz-set-1 | anti-conservative | 0.95 | 0.00 | 683 | 12325 | 682 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_RAJI_EBNA1.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 166 | 3001 | 166 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_RAJI_EBNA1.txt.gz-set-1 | anti-conservative | 0.95 | 0.00 | 166 | 3001 | 166 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_combine_IgG.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 485 | 8758 | 485 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_combine_IgG.txt.gz-set-1 | anti-conservative | 0.95 | 0.00 | 485 | 8758 | 485 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_combine_IgG_3.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 433 | 7812 | 432 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_C6661_EBNA1_vs_combine_IgG_3.txt.gz-set-1 | anti-conservative | 0.95 | 0.00 | 433 | 7812 | 433 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_C6661_EBNA1.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 379 | 6844 | 379 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_C6661_EBNA1.txt.gz-set-1 | anti-conservative | 0.95 | 0.00 | 379 | 6844 | 379 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_LCL_IgG.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 913 | 16478 | 912 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_LCL_IgG.txt.gz-set-1 | anti-conservative | 0.95 | 0.00 | 913 | 16479 | 912 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_MUTU_EBNA1.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 979 | 17665 | 978 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_MUTU_EBNA1.txt.gz-set-1 | anti-conservative | 0.95 | 0.00 | 979 | 17666 | 978 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_combine_IgG.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 777 | 14017 | 776 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_combine_IgG.txt.gz-set-1 | anti-conservative | 0.95 | 0.00 | 777 | 14017 | 776 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_combine_IgG_3.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 839 | 15151 | 839 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_LCL_EBNA1_vs_combine_IgG_3.txt.gz-set-1 | anti-conservative | 0.95 | 0.00 | 839 | 15151 | 839 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_C6661_EBNA1.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 161 | 2912 | 161 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_C6661_EBNA1.txt.gz-set-1 | anti-conservative | 0.95 | 0.00 | 161 | 2911 | 161 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_LCL_EBNA1.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 267 | 4817 | 267 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_LCL_EBNA1.txt.gz-set-1 | anti-conservative | 0.95 | 0.00 | 267 | 4817 | 267 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_MUTU_IgG.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 988 | 17825 | 987 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_MUTU_IgG.txt.gz-set-1 | anti-conservative | 0.95 | 0.00 | 988 | 17825 | 987 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_combine_IgG.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 648 | 11695 | 647 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_combine_IgG.txt.gz-set-1 | anti-conservative | 0.95 | 0.00 | 648 | 11695 | 648 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_combine_IgG_3.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 643 | 11600 | 642 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_MUTU_EBNA1_vs_combine_IgG_3.txt.gz-set-1 | anti-conservative | 0.95 | 0.00 | 643 | 11600 | 642 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_C6661_EBNA1.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 415 | 7491 | 414 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_C6661_EBNA1.txt.gz-set-1 | anti-conservative | 0.95 | 0.00 | 415 | 7491 | 415 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_LCL_EBNA1.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 465 | 8394 | 465 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_LCL_EBNA1.txt.gz-set-1 | anti-conservative | 0.95 | 0.00 | 465 | 8395 | 465 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_MUTU_EBNA1.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 410 | 7400 | 410 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_MUTU_EBNA1.txt.gz-set-1 | anti-conservative | 0.95 | 0.00 | 410 | 7400 | 410 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_RAJI_IgG.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 52 | 936 | 52 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_RAJI_IgG.txt.gz-set-1 | anti-conservative | 0.95 | 0.00 | 52 | 936 | 52 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_combine_IgG.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 368 | 6646 | 368 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_combine_IgG.txt.gz-set-1 | anti-conservative | 0.95 | 0.00 | 368 | 6646 | 368 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_combine_IgG_3.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 370 | 6681 | 370 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73887 | GSE73887_RAJI_EBNA1_vs_combine_IgG_3.txt.gz-set-1 | anti-conservative | 0.95 | 0.00 | 370 | 6681 | 370 | NA | NA | NA | NA | NA | NA | NA | |
| GSE73893 | GSE73893_DEseq-rip_significant_sites.txt.gz | anti-conservative | 0.95 | 0.00 | 76 | 1371 | 72 | NA | NA | NA | NA | NA | NA | NA | |
| GSE74103 | GSE74103_Tobacco_FS_v_WT_DESeq_refGene.all.annotated.txt.gz | anti-conservative | 0.80 | 0.62 | 718 | 10868 | 3480 | anti-conservative | 0.84 | 0.53 | 31 | 488 | 112 | ||
| GSE74103 | GSE74103_Tobacco_G1_v_WT_DESeq_refGene.all.annotated.txt.gz | anti-conservative | 0.78 | 0.42 | 1061 | 15742 | 5653 | anti-conservative | 0.86 | 0.27 | 49 | 794 | 151 | ||
| GSE74103 | GSE74103_Tobacco_GS_v_WT_DESeq_refGene.all.annotated.txt.gz | anti-conservative | 0.84 | 0.29 | 1406 | 22506 | 4992 | anti-conservative | 0.90 | 0.23 | 54 | 919 | 110 | ||
| GSE74171 | GSE74171_processed_aging_data.txt.gz | anti-conservative | 0.96 | 0.01 | 205 | 3742 | 160 | anti-conservative | 0.95 | 0.00 | 54 | 984 | 50 | ||
| GSE74929 | GSE74929_Diff_Exp.txt.gz-set-0 | anti-conservative | 0.95 | 0.00 | 663 | 11991 | 640 | NA | NA | NA | NA | NA | NA | NA | |
| GSE75147 | GSE75147_regulated.phf5a_kd_402.down.G166.list.txt.gz | anti-conservative | 0.94 | 0.02 | 84 | 1499 | 99 | NA | NA | NA | NA | NA | NA | NA | |
| GSE75147 | GSE75147_regulated.phf5a_kd_861.down.0827.list.txt.gz | anti-conservative | 0.95 | 0.02 | 137 | 2473 | 133 | NA | NA | NA | NA | NA | NA | NA | |
| GSE75147 | GSE75147_regulated.phf5a_kd_861.down.G166.list.txt.gz | anti-conservative | 0.95 | 0.01 | 282 | 5084 | 278 | NA | NA | NA | NA | NA | NA | NA | |
| GSE75147 | GSE75147_regulated.phf5a_kd_861.up.G166.list.txt.gz | anti-conservative | 0.94 | 0.04 | 48 | 860 | 55 | NA | NA | NA | NA | NA | NA | NA | |
| GSE75731 | GSE75731_ckvsd119a_gene_exp_diff.txt.gz | anti-conservative | 0.87 | 0.49 | 62 | 1024 | 169 | NA | NA | NA | NA | NA | NA | NA | |
| GSE75731 | GSE75731_ckvsdrug_gene_exp_diff.txt.gz | anti-conservative | 0.91 | 0.64 | 46 | 785 | 88 | NA | NA | NA | NA | NA | NA | NA | |
| GSE75731 | GSE75731_ckvsv149a_gene_exp_diff.txt.gz | anti-conservative | 0.95 | 0.73 | 36 | 659 | 36 | NA | NA | NA | NA | NA | NA | NA | |
| GSE75832 | GSE75832_DifferentialExpression_groupwise_comparisons.xlsx-sheet-P14_P2_gene_exp_down | anti-conservative | NA | 0.76 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE75878 | GSE75878_promoters.diff.gz | anti-conservative | NA | 0.44 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE75878 | GSE75878_splicing.diff.gz | anti-conservative | NA | 0.38 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE75962 | GSE75962_control_vs_H2O2.DEseq.txt.gz | anti-conservative | 0.81 | 0.77 | 161 | 2460 | 740 | anti-conservative | 0.64 | 0.69 | 29 | 350 | 311 | ||
| GSE75993 | GSE75993_processed_data.xls.gz-sheet-1_WT_vs_KO_DESeq_All | anti-conservative | NA | 0.94 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE77025 | GSE77025_gene_exp.diff.gz | anti-conservative | 0.81 | 0.35 | 1198 | 18522 | 5197 | NA | NA | NA | NA | NA | NA | NA | |
| GSE77218 | GSE77218_A3_A2.xlsx-sheet-diff_list | anti-conservative | 0.95 | 0.00 | 281 | 5072 | 281 | NA | NA | NA | NA | NA | NA | NA | |
| GSE77218 | GSE77218_A4_A2.xlsx-sheet-diff_list | anti-conservative | 0.95 | 0.00 | 260 | 4689 | 260 | NA | NA | NA | NA | NA | NA | NA | |
| GSE77218 | GSE77218_A4_A3.xlsx-sheet-diff_list | anti-conservative | 0.95 | 0.00 | 169 | 3051 | 169 | NA | NA | NA | NA | NA | NA | NA | |
| GSE77398 | GSE77398_mal_all6_cuffdiff_genes.xls.gz | anti-conservative | 0.96 | 0.76 | 69 | 1256 | 56 | NA | NA | NA | NA | NA | NA | NA | |
| GSE77427 | GSE77427_table_S1.xls.gz | anti-conservative | 0.95 | 0.00 | 51 | 914 | 51 | NA | NA | NA | NA | NA | NA | NA | |
| GSE77568 | GSE77568_CHIP_DMSO_vs_JQ1.txt.gz | anti-conservative | 0.95 | 0.00 | 948 | 17109 | 948 | NA | NA | NA | NA | NA | NA | NA | |
| GSE77568 | GSE77568_CHIP_DMSO_vs_input.txt.gz | anti-conservative | 0.95 | 0.00 | 1169 | 21096 | 1169 | NA | NA | NA | NA | NA | NA | NA | |
| GSE78824 | GSE78824_Cuffdiff_transcript_differential_expression_testing.tab.gz | anti-conservative | NA | 0.78 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE79039 | GSE79039_Feske_Tcon_DKO_vs_WT_norm_counts_DE_expression_all.txt.gz | anti-conservative | 0.85 | 0.62 | 197 | 3163 | 681 | anti-conservative | 0.82 | 0.41 | 76 | 1194 | 312 | ||
| GSE79039 | GSE79039_Feske_Tfh_DKO_vs_WT_norm_counts_DE_expression_all.txt.gz | anti-conservative | 0.89 | 0.73 | 149 | 2517 | 356 | anti-conservative | 0.81 | 0.52 | 62 | 955 | 279 | ||
| GSE79286 | GSE79286_CYC2vsWT_Conj-2.5hr_RNA-Seq.xlsx-sheet-Significant-FULL | anti-conservative | 0.95 | 0.00 | 83 | 1504 | 80 | NA | NA | NA | NA | NA | NA | NA | |
| GSE79286 | GSE79286_CYC2vsWT_Conj-2hr_RNA-Seq.xlsx-sheet-Significant-FULL | anti-conservative | 0.95 | 0.00 | 96 | 1735 | 91 | NA | NA | NA | NA | NA | NA | NA | |
| GSE79286 | GSE79286_CYC2vsWT_Conj-2hr_RNA-Seq.xlsx-sheet-Significant-UP | anti-conservative | 0.95 | 0.00 | 65 | 1173 | 61 | NA | NA | NA | NA | NA | NA | NA | |
| GSE79286 | GSE79286_CYC2vsWT_Conj-3.5hr_RNA-Seq.xlsx-sheet-Significant-FULL | anti-conservative | 0.95 | 0.00 | 65 | 1180 | 63 | NA | NA | NA | NA | NA | NA | NA | |
| GSE79820 | GSE79820_all_de_cuffdiff.tsv.gz | anti-conservative | 0.95 | 0.00 | 94 | 1708 | 91 | NA | NA | NA | NA | NA | NA | NA | |
| GSE79916 | GSE79916_Dataset_S1-JUM_output_for_differential_AS_analyses_of_PSIdeltaAB_and_full-length_PSI_male_fly_heads.xls.gz | anti-conservative | 0.93 | 0.13 | 275 | 4844 | 405 | NA | NA | NA | NA | NA | NA | NA | |
| GSE79916 | GSE79916_Dataset_S4-DESeq2_output_for_differential_overall_gene_expression_level_analysis_of_PSIdeltaAB_and_full-length_PSI_male_fly_heads.xls.gz | anti-conservative | 0.95 | 0.00 | 68 | 1225 | 68 | NA | NA | NA | NA | NA | NA | NA | |
| GSE80135 | GSE80135_siNeg_siProx_sig_results.csv.gz | anti-conservative | 0.87 | 0.79 | 137 | 2266 | 380 | anti-conservative | 0.77 | 0.50 | 39 | 571 | 215 | ||
| GSE80176 | GSE80176_HMLER_Ctrl_vs_DAC_Cuffdiff.txt.gz | anti-conservative | 0.95 | 0.00 | 100 | 1818 | 95 | NA | NA | NA | NA | NA | NA | NA | |
| GSE80264 | GSE80264_Group_2_vs._Group_1_Ensembl.gene.rpkm_more0.5_log2p1_qn.txt.gz-set-0 | anti-conservative | 0.95 | 0.01 | 161 | 2921 | 145 | NA | NA | NA | NA | NA | NA | NA | |
| GSE80264 | GSE80264_Group_2_vs._Group_1_Ensembl.gene.rpkm_more0.5_log2p1_qn.txt.gz-set-1 | anti-conservative | 0.95 | 0.00 | 161 | 2924 | 148 | NA | NA | NA | NA | NA | NA | NA | |
| GSE80264 | GSE80264_Group_2_vs._Group_1_Ensembl.gene.rpkm_more0.5_log2p1_qn.txt.gz-set-2 | anti-conservative | 0.94 | 0.02 | 156 | 2778 | 196 | NA | NA | NA | NA | NA | NA | NA | |
| GSE80264 | GSE80264_Group_3_vs._Group_1_Ensembl.gene.rpkm_more0.5_log2p1_qn.txt.gz-set-0 | anti-conservative | 0.95 | 0.01 | 167 | 3030 | 154 | NA | NA | NA | NA | NA | NA | NA | |
| GSE80264 | GSE80264_Group_3_vs._Group_1_Ensembl.gene.rpkm_more0.5_log2p1_qn.txt.gz-set-1 | anti-conservative | 0.93 | 0.03 | 158 | 2799 | 228 | NA | NA | NA | NA | NA | NA | NA | |
| GSE80264 | GSE80264_Group_3_vs._Group_1_Ensembl.gene.rpkm_more0.5_log2p1_qn.txt.gz-set-2 | anti-conservative | 0.95 | 0.00 | 168 | 3043 | 153 | NA | NA | NA | NA | NA | NA | NA | |
| GSE80349 | GSE80349_results.txt.gz-set-0 | anti-conservative | 0.92 | 0.07 | 309 | 5422 | 481 | NA | NA | NA | NA | NA | NA | NA | |
| GSE81043 | GSE81043_sh109_final_unique_DESeq_InfFixed_DiffExp.xlsx.gz | anti-conservative | 0.90 | 0.48 | 561 | 9634 | 1126 | anti-conservative | 0.92 | 0.14 | 89 | 1558 | 143 | ||
| GSE81128 | GSE81128_DESeq2_Results.txt.gz | anti-conservative | 0.89 | 0.32 | 507 | 8559 | 1217 | anti-conservative | 0.92 | 0.14 | 82 | 1435 | 130 | ||
| GSE81237 | GSE81237_DE_RNAseqseq_analysis_DESeq_TTP-AAvsGFP.csv.gz | anti-conservative | 0.80 | 0.66 | 192 | 2934 | 897 | anti-conservative | 0.75 | 0.59 | 39 | 560 | 241 | ||
| GSE81237 | GSE81237_DE_RNAseqseq_analysis_DESeq_TTP-AAvsTTP.csv.gz | anti-conservative | 0.82 | 0.56 | 251 | 3889 | 1072 | anti-conservative | 0.79 | 0.48 | 52 | 782 | 266 | ||
| GSE81237 | GSE81237_DE_RNAseqseq_analysis_DESeq_TTPvsGFP.csv.gz | anti-conservative | 0.79 | 0.75 | 128 | 1927 | 629 | anti-conservative | 0.73 | 0.69 | 28 | 387 | 202 | ||
| GSE83218 | GSE83218_HSC.txt.gz | anti-conservative | 0.76 | 0.88 | 47 | 671 | 281 | anti-conservative | 0.59 | 0.77 | 20 | 232 | 265 | ||
| GSE83375 | GSE83375_GB_glia.FPKM.txt.gz | anti-conservative | 0.80 | 0.66 | 198 | 3018 | 927 | NA | NA | NA | NA | NA | NA | NA | |
| GSE83541 | GSE83541_All_Genes_ZnfTG_Muscle_DESeq2_38.txt.gz | anti-conservative | 0.94 | 0.82 | 142 | 2540 | 165 | anti-conservative | 0.78 | 0.70 | 9 | 130 | 46 | ||
| GSE84481 | GSE84481_3xTg.txt.gz | anti-conservative | NA | 0.05 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE84481 | GSE84481_Neuro2a.txt.gz-set-0 | anti-conservative | 0.99 | 0.04 | 378 | 7089 | 96 | NA | NA | NA | NA | NA | NA | NA | |
| GSE84481 | GSE84481_Neuro2a.txt.gz-set-1 | anti-conservative | 0.99 | 0.04 | 378 | 7089 | 96 | NA | NA | NA | NA | NA | NA | NA | |
| GSE84737 | GSE84737_All_genes_unfiltered_DE.txt.gz | anti-conservative | 0.79 | 0.45 | 321 | 4805 | 1632 | NA | NA | NA | NA | NA | NA | NA | |
| GSE84737 | GSE84737_Genes_filtered_DE.txt.gz | anti-conservative | 0.80 | 0.47 | 226 | 3437 | 1082 | NA | NA | NA | NA | NA | NA | NA | |
| GSE85321 | GSE85321_Supplemental_Table_4_YAR_vs_YAD_RNA_seq_.xls.gz-sheet-EV_YAD_YAR_isoformexp | anti-conservative | NA | 0.46 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE85360 | GSE85360_P140_Setd1b_DEGS_021015.txt.gz | anti-conservative | 0.95 | 0.00 | 135 | 2446 | 134 | anti-conservative | 0.95 | 0.00 | 62 | 1124 | 62 | ||
| GSE85847 | GSE85847_matrix_rnaseq_GEO_submission_jsantos20160817.txt.gz | anti-conservative | NA | 0.66 | NA | NA | NA | anti-conservative | 0.85 | 0.57 | 42 | 687 | 141 | ||
| GSE86211 | GSE86211_CmrA_transcriptome_Expression_of_all_genes.xlsx-sheet-PA14vsPJ01 | anti-conservative | NA | 0.93 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE86211 | GSE86211_CmrA_transcriptome_Expression_of_all_genes.xlsx-sheet-PJ01vsPJ01dT | anti-conservative | NA | 0.96 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE87167 | GSE87167_all_genes.txt.gz | anti-conservative | 0.91 | 0.38 | 1095 | 18841 | 2175 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87365 | GSE87365_gene_exp_diff_fc_yes_reg_Fetal_stem_cells_and_FACS_sort_vs_Fetal_stem_cells.xls.gz | anti-conservative | 0.95 | 0.00 | 192 | 3479 | 179 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87365 | GSE87365_gene_exp_diff_fc_yes_reg_Fetal_stem_cells_vs_Fetal_myotubes.xls.gz | anti-conservative | 0.95 | 0.00 | 124 | 2248 | 118 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87398 | GSE87398_gene_exp.diff.gz | anti-conservative | 0.97 | 0.83 | 30 | 548 | 15 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87398 | GSE87398_genes_group_exp.diff.gz | anti-conservative | 0.99 | 0.83 | 30 | 555 | 7 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87448 | GSE87448_1944_common_genes_from_Venn_Diagram.txt.gz-set-0 | anti-conservative | 0.90 | 0.04 | 89 | 1516 | 189 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87448 | GSE87448_1944_common_genes_from_Venn_Diagram.txt.gz-set-1 | anti-conservative | 0.97 | 0.02 | 97 | 1792 | 57 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87448 | GSE87448_1944_common_genes_from_Venn_Diagram.txt.gz-set-2 | anti-conservative | 0.97 | 0.02 | 97 | 1789 | 60 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87448 | GSE87448_1944_common_genes_from_Venn_Diagram.txt.gz-set-3 | anti-conservative | 0.98 | 0.03 | 97 | 1802 | 46 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87448 | GSE87448_1944_common_genes_from_Venn_Diagram.txt.gz-set-4 | anti-conservative | 0.90 | 0.04 | 89 | 1516 | 189 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87448 | GSE87448_1944_common_genes_from_Venn_Diagram.txt.gz-set-5 | anti-conservative | 0.97 | 0.02 | 97 | 1792 | 57 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87448 | GSE87448_1944_common_genes_from_Venn_Diagram.txt.gz-set-6 | anti-conservative | 0.97 | 0.02 | 97 | 1789 | 60 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87448 | GSE87448_1944_common_genes_from_Venn_Diagram.txt.gz-set-7 | anti-conservative | 0.98 | 0.03 | 97 | 1802 | 46 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87448 | GSE87448_1944_common_genes_from_Venn_Diagram.txt.gz-set-8 | anti-conservative | 0.90 | 0.04 | 89 | 1516 | 189 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87448 | GSE87448_1944_common_genes_from_Venn_Diagram.txt.gz-set-9 | anti-conservative | 0.97 | 0.02 | 97 | 1792 | 57 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87448 | GSE87448_1944_common_genes_from_Venn_Diagram.txt.gz-set-10 | anti-conservative | 0.97 | 0.02 | 97 | 1789 | 60 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87448 | GSE87448_1944_common_genes_from_Venn_Diagram.txt.gz-set-11 | anti-conservative | 0.98 | 0.03 | 97 | 1802 | 46 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87448 | GSE87448_AKT_vs_CTRL_at_2fold-p005-4433_genes.txt.gz-set-0 | anti-conservative | 0.74 | 0.07 | 159 | 2228 | 1082 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87448 | GSE87448_AKT_vs_CTRL_at_2fold-p005-4433_genes.txt.gz-set-1 | anti-conservative | 0.98 | 0.03 | 222 | 4131 | 81 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87448 | GSE87448_AKT_vs_CTRL_at_2fold-p005-4433_genes.txt.gz-set-2 | anti-conservative | 0.83 | 0.25 | 145 | 2282 | 578 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87448 | GSE87448_AKT_vs_CTRL_at_2fold-p005-4433_genes.txt.gz-set-3 | anti-conservative | 0.74 | 0.23 | 133 | 1882 | 877 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87448 | GSE87448_KRAS_vs_CTRL_at_2fold-p005-4238_genes.txt.gz-set-0 | anti-conservative | 0.71 | 0.08 | 145 | 1960 | 1131 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87448 | GSE87448_KRAS_vs_CTRL_at_2fold-p005-4238_genes.txt.gz-set-1 | anti-conservative | 0.77 | 0.15 | 147 | 2146 | 833 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87448 | GSE87448_KRAS_vs_CTRL_at_2fold-p005-4238_genes.txt.gz-set-2 | anti-conservative | 0.98 | 0.03 | 212 | 3948 | 79 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87448 | GSE87448_KRAS_vs_CTRL_at_2fold-p005-4238_genes.txt.gz-set-3 | anti-conservative | 0.71 | 0.22 | 124 | 1674 | 947 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87448 | GSE87448_MYC_vs_CTRL_at_2fold-p005-3502_genes_Myc_Only.txt.gz-set-0 | anti-conservative | 0.77 | 0.07 | 132 | 1937 | 751 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87448 | GSE87448_MYC_vs_CTRL_at_2fold-p005-3502_genes_Myc_Only.txt.gz-set-1 | anti-conservative | 0.98 | 0.03 | 175 | 3272 | 56 | NA | NA | NA | NA | NA | NA | NA | |
| GSE87495 | GSE87495_results_dds_gencode22.csv.gz | anti-conservative | 0.88 | 0.34 | 516 | 8650 | 1306 | anti-conservative | 0.91 | 0.15 | 75 | 1298 | 145 | ||
| GSE90013 | GSE90013_cds_exp.diff_A_B_cds.txt.gz | anti-conservative | 0.98 | 0.03 | 139 | 2578 | 67 | NA | NA | NA | NA | NA | NA | NA | |
| GSE90013 | GSE90013_gene_exp.diff_A_B_Gene.txt.gz | anti-conservative | 0.97 | 0.02 | 161 | 2977 | 84 | NA | NA | NA | NA | NA | NA | NA | |
| GSE90013 | GSE90013_isoform_exp.diff_A_B_Isoform.txt.gz | anti-conservative | 0.98 | 0.03 | 146 | 2704 | 68 | NA | NA | NA | NA | NA | NA | NA | |
| GSE90013 | GSE90013_tss_group_exp.diff_A_B_tss.txt.gz | anti-conservative | 0.97 | 0.03 | 156 | 2880 | 77 | NA | NA | NA | NA | NA | NA | NA | |
| GSE90478 | GSE90478_Candidates_B_v_A_withNormData.csv.gz | anti-conservative | 0.95 | 0.00 | 117 | 2116 | 110 | anti-conservative | 0.95 | 0.00 | 67 | 1217 | 64 | ||
| GSE90478 | GSE90478_Candidates_D_v_B_withNormData_CL.csv.gz | anti-conservative | 0.95 | 0.00 | 177 | 3212 | 166 | anti-conservative | 0.95 | 0.00 | 78 | 1408 | 72 | ||
| GSE90615 | GSE90615_DifferentialExpression.xlsx-sheet-Vehicle_12dP-MI_vs_Pre-MI | anti-conservative | 0.76 | 0.48 | 320 | 4628 | 1895 | NA | NA | NA | NA | NA | NA | NA | |
| GSE90615 | GSE90615_DifferentialExpression.xlsx-sheet-Sfrp2_12dP-MI_vs_Pre-MI | anti-conservative | 0.79 | 0.43 | 363 | 5469 | 1804 | NA | NA | NA | NA | NA | NA | NA | |
| GSE90615 | GSE90615_DifferentialExpression.xlsx-sheet-1dP-MI_vs_Pre-MI | anti-conservative | 0.67 | 0.68 | 171 | 2177 | 1608 | NA | NA | NA | NA | NA | NA | NA | |
| GSE90977 | GSE90977_RNA-seq_COMPLETE_4Con-4CJD_SETS_DEFINITIVE_log2FC_0.5.xlsx.gz-sheet-120 dpi | anti-conservative | 0.81 | 0.06 | 81 | 1247 | 352 | anti-conservative | 0.93 | 0.01 | 30 | 530 | 40 | ||
| GSE90977 | GSE90977_RNA-seq_COMPLETE_4Con-4CJD_SETS_DEFINITIVE_log2FC_0.5.xlsx.gz-sheet-180 dpi | anti-conservative | 0.69 | 0.10 | 72 | 953 | 603 | anti-conservative | 0.85 | 0.05 | 36 | 577 | 124 | ||
| GSE90977 | GSE90977_RNA_seq_COMPLETE_4_4_SETS_DEFINITIVE.xlsx.gz-sheet-120 dpi | anti-conservative | 0.80 | 0.54 | 307 | 4656 | 1476 | anti-conservative | 0.83 | 0.37 | 60 | 954 | 236 | ||
| GSE90977 | GSE90977_RNA_seq_COMPLETE_4_4_SETS_DEFINITIVE.xlsx.gz-sheet-180 dpi | anti-conservative | 0.83 | 0.82 | 129 | 2029 | 510 | anti-conservative | 0.89 | 0.83 | 19 | 325 | 47 | ||
| GSE92282 | GSE92282_Results.csv.gz | anti-conservative | 0.95 | 0.00 | 109 | 1972 | 103 | NA | NA | NA | NA | NA | NA | NA | |
| GSE92506 | GSE92506_DEseq2_wholeTable.txt.gz | anti-conservative | 0.82 | 0.64 | 364 | 5645 | 1559 | anti-conservative | 0.81 | 0.42 | 50 | 767 | 217 | ||
| GSE93684 | GSE93684_S1-1A-vs-R1-1A.compare.txt.gz | anti-conservative | 0.88 | 0.30 | 2795 | 46676 | 7312 | NA | NA | NA | NA | NA | NA | NA | |
| GSE93827 | GSE93827_LMP1_2a_vs_GFP.txt.gz | anti-conservative | 0.87 | 0.51 | 371 | 6118 | 1080 | anti-conservative | 0.89 | 0.27 | 64 | 1081 | 155 | ||
| GSE93877 | GSE93877_NB4_RNASeq_ATRA.txt.gz | anti-conservative | 0.90 | 0.84 | 97 | 1659 | 194 | anti-conservative | 0.83 | 0.75 | 28 | 447 | 110 | ||
| GSE93877 | GSE93877_NB4_RNASeq_DMSO.txt.gz | anti-conservative | NA | 0.95 | NA | NA | NA | anti-conservative | NA | 0.93 | NA | NA | NA | ||
| GSE94534 | GSE94534_MSTR_gene-P005_FC1.2_FPKM2.txt.gz | anti-conservative | 0.97 | 0.02 | 171 | 3164 | 95 | NA | NA | NA | NA | NA | NA | NA | |
| GSE97174 | GSE97174_DEseq_DifferentialGeneExpression.txt.gz | anti-conservative | 0.95 | 0.00 | 309 | 5599 | 286 | NA | NA | NA | NA | NA | NA | NA | |
| GSE97406 | GSE97406_CRP_K100Q_vs_CRP_Control.csv.gz-set-0 | anti-conservative | 0.94 | 0.01 | 51 | 922 | 57 | NA | NA | NA | NA | NA | NA | NA | |
| GSE97406 | GSE97406_CRP_K100R_vs_CRP_Control.csv.gz-set-0 | anti-conservative | 0.94 | 0.01 | 57 | 1016 | 66 | NA | NA | NA | NA | NA | NA | NA | |
| GSE97406 | GSE97406_CRP_WT_vs_CRP_Control.csv.gz-set-0 | anti-conservative | 0.95 | 0.01 | 56 | 1015 | 53 | NA | NA | NA | NA | NA | NA | NA | |
| GSE98526 | GSE98526_A12_vs_UA159T5.txt.gz | anti-conservative | 0.82 | 0.58 | 36 | 560 | 145 | NA | NA | NA | NA | NA | NA | NA | |
| GSE98526 | GSE98526_A1_vs_UA159T5.txt.gz | anti-conservative | NA | 0.80 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE98526 | GSE98526_UA159T5_vs_UA159T0.txt.gz | anti-conservative | NA | 0.93 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |
| GSE99944 | GSE99944_Digo_expression_results_significatif.xlsx-sheet-padj<=0.05 UP | anti-conservative | 0.95 | 0.00 | 214 | 3881 | 195 | anti-conservative | 0.95 | 0.00 | 93 | 1684 | 87 | ||
| GSE99944 | GSE99944_Digo_expression_results_significatif.xlsx-sheet-padj<=0.05 DOWN | anti-conservative | 0.95 | 0.00 | 204 | 3708 | 184 | anti-conservative | 0.95 | 0.00 | 57 | 1039 | 52 | ||
| GSE99944 | GSE99944_Digo_expression_results_significatif.xlsx-sheet-padj<=0.05 | anti-conservative | 0.95 | 0.00 | 418 | 7589 | 380 | anti-conservative | 0.95 | 0.00 | 89 | 1610 | 83 | ||
| GSE99944 | GSE99944_Digo_expression_results_significatif.xlsx-sheet-padj<=0.10 UP | anti-conservative | 0.95 | 0.01 | 235 | 4252 | 224 | anti-conservative | 0.95 | 0.01 | 95 | 1725 | 88 | ||
| GSE99944 | GSE99944_Digo_expression_results_significatif.xlsx-sheet-padj<=0.10 DOWN | anti-conservative | 0.96 | 0.01 | 227 | 4123 | 199 | anti-conservative | 0.96 | 0.01 | 59 | 1067 | 52 | ||
| GSE99944 | GSE99944_Digo_expression_results_significatif.xlsx-sheet-padj<=0.10 | anti-conservative | 0.95 | 0.01 | 462 | 8375 | 423 | anti-conservative | 0.95 | 0.01 | 87 | 1579 | 79 | ||
| GSE35616 | GSE35616_DESeq.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | NA | 0.87 | NA | NA | NA | |
| GSE36710 | GSE36710_RBFOX1_Transcriptional_Events.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | NA | 1.00 | NA | NA | NA | |
| GSE40218 | GSE40218_processed_DESeq.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.96 | 0.89 | 9 | 161 | 8 | |
| GSE41766 | GSE41766_PRE1-Ox_IBH1-Ox_vs_IBH1-Ox.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.91 | 0.29 | 50 | 870 | 99 | |
| GSE44233 | GSE44233_processed_data.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.64 | 0.72 | 18 | 221 | 198 | |
| GSE44333 | GSE44333_d33_mock_vs_mhv_res_noNA.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | NA | 0.96 | NA | NA | NA | |
| GSE46046 | GSE46046_GenesTable.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | NA | 0.93 | NA | NA | NA | |
| GSE46066 | GSE46066_ICRFVsDMSO.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.67 | 0.79 | 20 | 256 | 191 | |
| GSE50198 | GSE50198_Tet1kd_vs_v6.5_DESeq_results.txt.gz-set-0 | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.85 | 0.35 | 76 | 1229 | 266 | |
| GSE50198 | GSE50198_Tet1kd_vs_v6.5_DESeq_results.txt.gz-set-1 | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.91 | 0.17 | 105 | 1801 | 208 | |
| GSE50198 | GSE50198_Tet2kd_vs_v6.5_DESeq_results.txt.gz-set-0 | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.80 | 0.66 | 37 | 566 | 179 | |
| GSE50198 | GSE50198_Tet2kd_vs_v6.5_DESeq_results.txt.gz-set-1 | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.86 | 0.31 | 81 | 1321 | 251 | |
| GSE54641 | GSE54641_DESeq.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | NA | 0.98 | NA | NA | NA | |
| GSE56346 | GSE56346_wtNplus_vs_wtNminus_DESeq_output.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.89 | 0.23 | 78 | 1319 | 192 | |
| GSE58865 | GSE58865_Hyphae_vs_Oidia_DESeq_results.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.94 | 0.03 | 56 | 999 | 65 | |
| GSE58910 | GSE58910_SenescentAstrocytesDEanalysis_v2.csv.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.84 | 0.69 | 16 | 252 | 58 | |
| GSE59715 | GSE59715_finalHiCRNAseqTable.csv.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.62 | 0.44 | 43 | 506 | 512 | |
| GSE61031 | GSE61031_DE_polyaWT_vs_polyaKO.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.90 | 0.84 | 19 | 323 | 41 | |
| GSE61033 | GSE61033_DE_exonWT_vs_exonKOnoRN.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.80 | 0.71 | 32 | 490 | 158 | |
| GSE61033 | GSE61033_DE_intronWT_vs_intronKOnoRN.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.99 | 0.86 | 20 | 384 | 5 | |
| GSE61336 | GSE61336_results_167_vs_WTL.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.80 | 0.42 | 26 | 394 | 125 | |
| GSE61336 | GSE61336_results_167_vs_WTZ.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.85 | 0.41 | 28 | 446 | 91 | |
| GSE61336 | GSE61336_results_WTL_vs_WTZ.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | NA | 0.99 | NA | NA | NA | |
| GSE61954 | GSE61954_all_genes_expression_values_supp_table.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.68 | 0.59 | 36 | 456 | 323 | |
| GSE63091 | GSE63091_diffana_DESeq_GFP-4A3-Y14_MLN51-UPF1.Ensembl65.tsv.gz-set-0 | NA | NA | NA | NA | NA | NA | NA | anti-conservative | NA | 0.94 | NA | NA | NA | |
| GSE63091 | GSE63091_diffana_DESeq_GFP-4A3-Y14_MLN51-UPF1.Ensembl65.tsv.gz-set-1 | NA | NA | NA | NA | NA | NA | NA | anti-conservative | NA | 0.99 | NA | NA | NA | |
| GSE63510 | GSE63510_ko_vs_wt_fold_changes_p_values.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.87 | 0.29 | 65 | 1068 | 187 | |
| GSE63836 | GSE63836_C15Dx_versus_Untr.DESeq.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.86 | 0.42 | 65 | 1066 | 194 | |
| GSE63836 | GSE63836_Dx_versus_C15Dx.DESeq.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.89 | 0.83 | 20 | 342 | 48 | |
| GSE65328 | GSE65328_A17_6V.tab.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | NA | 0.92 | NA | NA | NA | |
| GSE65406 | GSE65406_control_vs_gld1_DESeq.csv.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | NA | 1.00 | NA | NA | NA | |
| GSE65406 | GSE65406_youngadults_vs_gld1_DESeq.csv.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | NA | 1.00 | NA | NA | NA | |
| GSE68998 | GSE68998_DiffExpDeseq2_mdx2_NOut_3.6.14.csv.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.80 | 0.47 | 31 | 473 | 151 | |
| GSE69311 | GSE69311_deseq_diff_genes.csv.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.68 | 0.79 | 9 | 121 | 83 | |
| GSE70141 | GSE70141_Ax2_0H_1+2_ChdC_0H_1+2_DESeq.results.genenames.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.77 | 0.38 | 30 | 435 | 170 | |
| GSE70141 | GSE70141_Ax2_0H_1_2_Ax2_10H_1_2_DESeq.results.genenames.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.94 | 0.06 | 75 | 1329 | 93 | |
| GSE70141 | GSE70141_Ax2_10H_1_2_ChdC_12H_1_2_DESeq.results.genenames.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.91 | 0.15 | 81 | 1406 | 147 | |
| GSE70860 | GSE70860_DEaxons.csv.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.94 | 0.21 | 11 | 202 | 14 | |
| GSE72390 | GSE72390_DiffExpr_Location_7-12_vs_1-6_Oncorhynchus_keta_de_novo.xlsx | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.93 | 0.79 | 13 | 238 | 19 | |
| GSE72860 | GSE72860_RNA-seq_log2fdc.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.78 | 0.64 | 32 | 477 | 176 | |
| GSE74920 | GSE74920_SupplementalTable1.xlsx.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.86 | 0.33 | 58 | 942 | 186 | |
| GSE74920 | GSE74920_SupplementalTable3.xlsx.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.80 | 0.46 | 41 | 618 | 195 | |
| GSE74993 | GSE74993_SupplementalTables.xlsx-sheet-Table S1 | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.86 | 0.33 | 58 | 942 | 186 | |
| GSE74993 | GSE74993_SupplementalTables.xlsx-sheet-Table S3 | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.80 | 0.46 | 41 | 618 | 195 | |
| GSE75833 | GSE75833_DESeq-processed_FB.control_vs_BR.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.92 | 0.14 | 40 | 707 | 64 | |
| GSE76257 | GSE76257_O-VG_OGS2.csv.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.87 | 0.21 | 29 | 476 | 79 | |
| GSE77351 | GSE77351_Farshchian.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | NA | 0.89 | NA | NA | NA | |
| GSE77693 | GSE77693_deseq.comparison.csv.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | NA | 1.00 | NA | NA | NA | |
| GSE77901 | GSE77901_SLNCR1_vs_vector.deseq.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.57 | 0.65 | 35 | 384 | 500 | |
| GSE77901 | GSE77901_SLNCR1cons_vs_vector.deseq.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.60 | 0.92 | 9 | 104 | 115 | |
| GSE77901 | GSE77901_SLNCR1deltacons_vs_vector.deseq.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.79 | 0.57 | 59 | 889 | 303 | |
| GSE77902 | GSE77902_WM1976_siRNA1_vs_control.deseq.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.68 | 0.78 | 27 | 346 | 234 | |
| GSE78240 | GSE78240_DESeq_Output.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.80 | 0.59 | 39 | 597 | 187 | |
| GSE78967 | GSE78967_Deseq_Analysis.xlsx | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.81 | 0.38 | 57 | 872 | 250 | |
| GSE79633 | GSE79633_DESeq2_out_FO_GFP_vs_WT.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.80 | 0.77 | 23 | 345 | 110 | |
| GSE79723 | GSE79723_DEseq_LG1401-LG437-LG8736_LG1405-LG435-LG8737_DEG_list.csv.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | NA | 0.89 | NA | NA | NA | |
| GSE79822 | GSE79822_Deseq_totalRNA.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.78 | 0.46 | 10 | 149 | 53 | |
| GSE80128 | GSE80128_P035_DESeq_KO-WT_pathway.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.73 | 0.80 | 12 | 165 | 83 | |
| GSE80135 | GSE80135_Lipo_siProx_SC_results.csv.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.75 | 0.82 | 14 | 193 | 89 | |
| GSE80135 | GSE80135_Lipo_siProx_sig_results.csv.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.75 | 0.73 | 20 | 286 | 129 | |
| GSE80135 | GSE80135_siNeg_Lipo_results.csv.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.74 | 0.77 | 18 | 256 | 119 | |
| GSE80135 | GSE80135_siNeg_siProx_SC_results.csv.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.74 | 0.78 | 17 | 233 | 111 | |
| GSE81059 | GSE81059_cns-control_vs_head-control.csv.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.92 | 0.13 | 76 | 1319 | 127 | |
| GSE81593 | GSE81593_1.Mcf10A_p53delVec_and_p53delHras.xlsx | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.85 | 0.36 | 49 | 787 | 161 | |
| GSE81593 | GSE81593_2.Mcf10A_Vec_and_Hras.xlsx | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.75 | 0.63 | 25 | 360 | 165 | |
| GSE81865 | GSE81865_RNAseq_uninjured-14dpi.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.86 | 0.46 | 27 | 437 | 82 | |
| GSE83134 | GSE83134_RYBPfl.DESeq2.Output.txt.gz-set-0 | NA | NA | NA | NA | NA | NA | NA | anti-conservative | NA | 0.99 | NA | NA | NA | |
| GSE83736 | GSE83736_DESeq2.Vav.KO.C_vs_Vav.WT.C.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.85 | 0.30 | 62 | 1002 | 208 | |
| GSE83736 | GSE83736_DESeq2.Vav.WTvsKO.StimulatedInteractions.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.89 | 0.32 | 64 | 1079 | 155 | |
| GSE85328 | GSE85328_Leukaemia_MLL-AF9_RingKO.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.76 | 0.76 | 34 | 489 | 208 | |
| GSE85565 | GSE85565_Result_Table.csv.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.83 | 0.55 | 32 | 501 | 125 | |
| GSE85627 | GSE85627_mDUX-mESC.xlsx.gz-sheet-Unsorted | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.92 | 0.16 | 78 | 1368 | 127 | |
| GSE85627 | GSE85627_mDUX-mESC.xlsx.gz-sheet-Sorted | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.90 | 0.18 | 88 | 1521 | 177 | |
| GSE86521 | GSE86521_DESeq_out_KO_vs_WT.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.88 | 0.74 | 30 | 503 | 75 | |
| GSE87706 | GSE87706_SM_vs_RODI.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.91 | 0.13 | 37 | 642 | 73 | |
| GSE87808 | GSE87808_diffExp_Slc7a5_Cerebellum_allGenes.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.75 | 0.83 | 14 | 196 | 84 | |
| GSE88970 | GSE88970_Whsc1_proB_DE.xlsx-sheet-4P_05_WT_vs_KO_results | NA | NA | NA | NA | NA | NA | NA | anti-conservative | NA | 0.88 | NA | NA | NA | |
| GSE89004 | GSE89004_ppGpp0_vs_H78_differential_all.xls.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.90 | 0.21 | 38 | 650 | 80 | |
| GSE89238 | GSE89238_SET2_KO_DESeq2_output.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.75 | 0.67 | 16 | 225 | 100 | |
| GSE89773 | GSE89773_combined_expression_table.txt.gz-set-0 | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.91 | 0.21 | 64 | 1106 | 120 | |
| GSE89773 | GSE89773_combined_expression_table.txt.gz-set-1 | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.87 | 0.26 | 57 | 938 | 164 | |
| GSE90889 | GSE90889_geo_hiPSC-RPE_Vehicle_vs_NAM.xlsx | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.81 | 0.65 | 30 | 468 | 133 | |
| GSE93313 | GSE93313_DESeq_2Dvs3D.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.81 | 0.42 | 66 | 1015 | 294 | |
| GSE93313 | GSE93313_DESeq_2DvsTranswell.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.87 | 0.34 | 81 | 1345 | 224 | |
| GSE93313 | GSE93313_DESeq_3DvsTranswell.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.81 | 0.55 | 52 | 796 | 238 | |
| GSE93547 | GSE93547_LMvsWTM_cleaned_deseq2.csv.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.87 | 0.32 | 39 | 644 | 116 | |
| GSE93748 | GSE93748_shTAZ_in_DU145_proceeded_data.xlsx | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.89 | 0.91 | 10 | 175 | 26 | |
| GSE93870 | GSE93870_processed_file.xlsx-sheet-293FT_ZIKV.Vs.293FT_Control.DES | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.81 | 0.88 | 13 | 206 | 58 | |
| GSE93870 | GSE93870_processed_file.xlsx-sheet-BJ_ZIKV.Vs.BJ_Control.DESeq_Ana | NA | NA | NA | NA | NA | NA | NA | anti-conservative | NA | 0.96 | NA | NA | NA | |
| GSE93870 | GSE93870_processed_file.xlsx-sheet-CHME_ZIKV.Vs.CHME_Control.DESeq | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.75 | 0.81 | 18 | 262 | 119 | |
| GSE93870 | GSE93870_processed_file.xlsx-sheet-THP1_ZIKV.Vs.THP1_Control.DESeq | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.78 | 0.48 | 46 | 686 | 251 | |
| GSE94280 | GSE94280_DESeq2_results_Y_vs_O.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.89 | 0.33 | 60 | 1020 | 143 | |
| GSE94512 | GSE94512_NaPi_vs_Lys.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | NA | 0.98 | NA | NA | NA | |
| GSE94587 | GSE94587_DESEQ_Female_WT_vs_Female_del.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.91 | 0.83 | 14 | 239 | 27 | |
| GSE94587 | GSE94587_DESEQ_Male_WT_vs_Female_WT.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.87 | 0.60 | 32 | 522 | 90 | |
| GSE94587 | GSE94587_DESEQ_Male_WT_vs_Male_del.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.95 | 0.80 | 18 | 321 | 17 | |
| GSE95337 | GSE95337_DESeq_EH_Control.vs.dKO.res.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.87 | 0.38 | 72 | 1191 | 212 | |
| GSE96626 | GSE96626_DE_TrtVsVeh.xlsx | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.93 | 0.87 | 14 | 242 | 20 | |
| GSE96999 | GSE96999_DESeq2_miseq_output.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.89 | 0.23 | 56 | 937 | 137 | |
| GSE97395 | GSE97395_Treat_vs_control_diff.txt.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.78 | 0.60 | 36 | 542 | 194 | |
| GSE99944 | GSE99944_Digo_expression_SD-T50nM_SD-Ctrl.csv.gz | NA | NA | NA | NA | NA | NA | NA | anti-conservative | 0.86 | 0.34 | 55 | 888 | 174 |
We need to dicuss some things here.
Reproducibility of ChIP-Seq results is poor and highly dependent on the software tools used (Steinhauser et al. 2016).
Dowle, Matt, and Arun Srinivasan. 2019. Data.table: Extension of ‘Data.frame‘. https://CRAN.R-project.org/package=data.table.
Steinhauser, S., N. Kurzawa, R. Eils, and C. Herrmann. 2016. “A comprehensive comparison of tools for differential ChIP-seq analysis.” Brief. Bioinformatics 17 (6): 953–66.
Temple Lang, Duncan, and the CRAN Team. 2019. XML: Tools for Parsing and Generating Xml Within R and S-Plus. https://CRAN.R-project.org/package=XML.
Wickham, Hadley, and Jennifer Bryan. 2018. Readxl: Read Excel Files. https://CRAN.R-project.org/package=readxl.
Wickham, Hadley, James Hester, and Jeroen Ooms. 2018. Xml2: Parse Xml. https://CRAN.R-project.org/package=xml2.